| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5575 |
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| Symbol | |
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| ID | 5751195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6198376 |
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| End bp | 6198921 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300708 |
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| Product | shikimate kinase |
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| Protein accession | YP_001566589 |
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| Protein GI | 160901007 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.421314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATTCCG ATCAAGGTCC TGCCTCGCTC CGTGCGCCGG TGGTGGCCCT GATCGGCCTG
CCCGGCTCCG GCAAATCGAC CATAGGGCGC CAGCTGGCGC GCTTGTGGTC GATGCGTTTT
GTGGATTCGG ACCATGTGAT CGAGCAGCGC CTGGGCTGCA GCATCCGGGA GTTTTTCGAG
CGCGAGGGCG AGCAGGCTTT TCGAGACATG GAGTCGCAGG TCATTGATGA GCTGTCGGCC
TCCACATCCA GCCTGCTGCT GTCCACGGGC GGTGGCGTGG TGCTGCGCGA GCAAAACCGA
CGCCATCTGC ATGCGCGCAC CCAGGTCTTC TATCTGGATT GCACGCCAGA GGCCATCGCC
GCGCGGCTGC GCAACGATGT GACGCGGCCC TTGCTGCAGG TGGAAGATCC GGCACTGCGC
CTGCGGGAGC TGCTGCTGCA ACGCGAGCCG CTTTATCTGG AGACGGCTCA CTTCGTGATC
CAGACATCCG GCCTGTCTGT GGCGCAGGCT GCGCAGCGCA TACGCATGCA GGCGGAACTG
GCCTGA
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| Protein sequence | MNSDQGPASL RAPVVALIGL PGSGKSTIGR QLARLWSMRF VDSDHVIEQR LGCSIREFFE
REGEQAFRDM ESQVIDELSA STSSLLLSTG GGVVLREQNR RHLHARTQVF YLDCTPEAIA
ARLRNDVTRP LLQVEDPALR LRELLLQREP LYLETAHFVI QTSGLSVAQA AQRIRMQAEL
A
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