Gene Daci_5572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5572 
Symbol 
ID5751192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6195126 
End bp6195746 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID641300705 
Producthypothetical protein 
Protein accessionYP_001566586 
Protein GI160901004 
COG category[S] Function unknown 
COG ID[COG3310] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCAACCACGA GATTCGCGCG GCCGAGTTTC CGCCTGTCAC CGTGATCGAG 
GATACGGTGC ACTGGCTCGA AAAGGCCGTG ATCGGCCTGA ACCTGTGCCC CTTCGCCAAG
GGCGTGCACA TCAAGGGCCA GATCCACTAC ACGGTCAGCC AGGCCACCGA CGCCGAGGGC
GTGGCGGCGG ATCTGCACCG CGAGCTGGAG GCGCTGGCCG AGGCCTCGCC CGAGAAGCGC
GACACCACGC TGCTGATCCT GCCCCATGCG CTGCAGGAGT TCCTGGACTT CAACGACTTC
CTCGAAGTGG CCGACGCCAT GGTCGAGGAG CTGGACCTGG GTGGCATCCT GCAGGTGGCC
TCGTTCCATC CGCAGTTCCA GTTCGAGGGC ACCGAAGCCG ACGACGTCAC CAACTGCACC
AACCGCTCGC CCTATCCCAC GCTGCACCTG CTGCGCGAGG ACAGCATAGA CAAGGCGGTC
GAAGCATTCC CCGAGGCGGA GTCCATCTAC GAGCGCAACA TGGAGACGCT GGAGAAGATC
GGCATCGAAG GCTGGCTGGA CATGGGCGTG GGCGCGCGCT GCCCCGTGGC GCATGCAGCC
AAGCCGGGCG CAGCCGAATG A
 
Protein sequence
MTDTNHEIRA AEFPPVTVIE DTVHWLEKAV IGLNLCPFAK GVHIKGQIHY TVSQATDAEG 
VAADLHRELE ALAEASPEKR DTTLLILPHA LQEFLDFNDF LEVADAMVEE LDLGGILQVA
SFHPQFQFEG TEADDVTNCT NRSPYPTLHL LREDSIDKAV EAFPEAESIY ERNMETLEKI
GIEGWLDMGV GARCPVAHAA KPGAAE