Gene Daci_5551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5551 
Symbol 
ID5751171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6170258 
End bp6170650 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID641300684 
Productputative transmembrane protein 
Protein accessionYP_001566565 
Protein GI160900983 
COG category[S] Function unknown 
COG ID[COG3671] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.272582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACG ATTACATCGA AGTCCGTGCC CTGGACCAGT CCCGCATCGA AGGCCTCAAG 
GCCTGGGGCT GGGTCAGCTA CCTGCTGCAC CTGGTGGTGG CCGTGGCCGC CGTCGTGCCA
GGCGCACAGC CCAGCATTGC GCTGCTGGTG ATCTCACTGA TCATCGATCT GGTCAAGCGC
GGCGACGCCG AAGGCAGCTG GATGGCCAAT CACTTCTCGT GGCGCATCCG CAGCGTGATC
TGGGCCGGCA TCCTGTACCT GGTCACGGCG CCGCTGTGGC TGCTGTTCTT CGTGCCCGGC
TGGATCGCCT GGACCGTCAT CTCCATCTGG TTCCTCTACC GCATCGTGCG CGGCATGGTC
GCCATGAACC GCAACCAGGC CGTGGACCGC TGA
 
Protein sequence
MNDDYIEVRA LDQSRIEGLK AWGWVSYLLH LVVAVAAVVP GAQPSIALLV ISLIIDLVKR 
GDAEGSWMAN HFSWRIRSVI WAGILYLVTA PLWLLFFVPG WIAWTVISIW FLYRIVRGMV
AMNRNQAVDR