Gene Daci_5527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5527 
Symbol 
ID5751147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6144094 
End bp6145362 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content68% 
IMG OID641300660 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_001566541 
Protein GI160900959 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAC TCCTGATTCG CGGTGGCCGA GCGCTGCATG GCGAGGTGAC GGTCTCCGGC 
GCCAAGAATG CCGCCTTGCC CGAGCTGTGC GCCGCGCTGC TGTCGTCCGA GCCCGTCACC
CTGCGCAACG TGCCGCGCCT GCAGGACGTG GCCACCATGC TCAAGCTCAT CCGCAACATG
GGTGTCAGCG CCGAGCACGA TGACAGCGGC ACCGTGCGCA TCAACGCCGG CTCTCTGTCC
AACCCCGAGG CACCCTACGA ACTGGTCAAG ACCATGCGCG CCTCGGTCCT GGCCCTGGGC
CCGCTGCTGG CCCGATTCGG CCAGGCCCGC GTGTCGCTGC CCGGTGGCTG CGCCATCGGC
TCGCGCCCCG TGGACCAGCA CATCAAGGGC CTGCAGGCCA TGGGCGCCGA GATCGTTGTC
GAGAACGGCT ACATGAACGC GTGCCTGCCC GGGCATCTCA AGCGCCTGCA GGGCGCCCGC
ATCACCACCG ACATGGTGAC CGTCACGGGC ACCGAGAACT TCCTGATGGC CGCCGTGCTG
GCCGAAGGCG AGACCGTGCT GGAAAACGCC GCCATGGAGC CAGAGATCGG CGACCTGGCC
GAAATGCTCA TCAAGATGGG CGCAAGAATC GAAGGCCATG GCACCGGCCG CATCGTCATC
CAGGGCGTGG AACGCCTGGG CGGCTGCGAG CACCAGGTGG TGGCCGACCG CATCGAGGCC
GGCACCTTTT TGTGCGCCGT GGCCGCCACG GGCGGCAATG CGCTGCTGCG CAATGGCCGC
GCCGACCATC TGGGCGCCGT CATCGACAAG CTCAAGGATG CGGGCGCCGA GGTGTCCGCC
GAGGACGGCG GCATTCGCGT GCGCGCGGCC GGCAAGCTCA AGGCCCAGAG CTTTCGCACC
ACCGAATACC CGGGCTTTCC CACCGACATG CAGGCGCAGT TCATGGCGCT GAACCTGGTG
GCCGAAGGCT GCAGCATGGT CACCGAGACC ATCTTCGAGA ACCGCTTCAT GCACGTGGAT
GAAATGCTGC GCCTGGGCGC GCAGATCACC ACCGACGGGC GCGTTGCCAC CATCACCGGC
AGCCAGTCGC TGTCGGGCGC GGCCGTCATG GCCACCGACC TGCGCGCTTC GGCCAGCCTG
GTCATCGCCG GCCTCGTGGC CAAGGGCGAG ACCCTGGTCG ATCGCATCTA TCATCTGGAC
CGCGGCTACG ATCGCATGGA AGACAAGCTG CGCGGCCTGG GTGCCGACAT CGAAAGAGTT
TCCCAATGA
 
Protein sequence
MDKLLIRGGR ALHGEVTVSG AKNAALPELC AALLSSEPVT LRNVPRLQDV ATMLKLIRNM 
GVSAEHDDSG TVRINAGSLS NPEAPYELVK TMRASVLALG PLLARFGQAR VSLPGGCAIG
SRPVDQHIKG LQAMGAEIVV ENGYMNACLP GHLKRLQGAR ITTDMVTVTG TENFLMAAVL
AEGETVLENA AMEPEIGDLA EMLIKMGARI EGHGTGRIVI QGVERLGGCE HQVVADRIEA
GTFLCAVAAT GGNALLRNGR ADHLGAVIDK LKDAGAEVSA EDGGIRVRAA GKLKAQSFRT
TEYPGFPTDM QAQFMALNLV AEGCSMVTET IFENRFMHVD EMLRLGAQIT TDGRVATITG
SQSLSGAAVM ATDLRASASL VIAGLVAKGE TLVDRIYHLD RGYDRMEDKL RGLGADIERV
SQ