Gene Daci_5526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5526 
Symbol 
ID5751146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6143447 
End bp6144097 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID641300659 
ProductATP phosphoribosyltransferase 
Protein accessionYP_001566540 
Protein GI160900958 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA CGATTGCCCT GTCCAAGGGC CGTATCTACG ACGAAACCGT GCCGCTGCTG 
GCCGCTGCCG GCATCTCGGT CAGCGAAGAC ATTGAAAAGT CGCGCAAGCT GATCTTCGAG
ACCAACAAGA GCGACGTGCG CGTGGTGCTG GTGCGCGCCT CCGACGTGCC GGTCTATGTG
CAGTACGGCG GCGCCGATCT CGGCGTGGCC GGCCTGGATT CGCTGATCGA GCATGGCGCC
CAGGGCCTGT ACCAGCCCCT GGACCTGAAG ATCGCGCGCT GCCGCGTCAG CGTGGCCGTG
CGCAACGGCT TCGACTATGC GCTGGCCGTC AAGCAGGGCG CCCGCCTGCG CATCGCCACC
AAGTACCCCG AGATCGCGCG CAACTTCTTT GCCACCAAGG GCGTGCACGT GGACATGGTC
AAGCTCTACG GCTCCATGGA GCTGGCCCCG CTGACCGGCA TGGCCGACGC CATCGTCGAC
TTGGTGTCCA CCGGCAACAC GCTCAAGGCC AATGACCTGG TCGAGGTCGA GCCCATCATG
GAGATCAGCT CGCGCCTGGT GGTCAACCAG GCGGCGCTCA AGCTCAAGCG CGAGCCGCTG
CGCCACATCA TCGATGCCTT CGCCGAGGCG GTAAATGGCC CCAGGGGCTG A
 
Protein sequence
MTITIALSKG RIYDETVPLL AAAGISVSED IEKSRKLIFE TNKSDVRVVL VRASDVPVYV 
QYGGADLGVA GLDSLIEHGA QGLYQPLDLK IARCRVSVAV RNGFDYALAV KQGARLRIAT
KYPEIARNFF ATKGVHVDMV KLYGSMELAP LTGMADAIVD LVSTGNTLKA NDLVEVEPIM
EISSRLVVNQ AALKLKREPL RHIIDAFAEA VNGPRG