| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5431 |
|---|
| Symbol | |
|---|
| ID | 5751048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6031062 |
|---|
| End bp | 6031610 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641300561 |
|---|
| Product | outer membrane lipoprotein LolB |
|---|
| Protein accession | YP_001566445 |
|---|
| Protein GI | 160900863 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCACC GCGCCGTGCC CGGATTGCCG CATCCCGCCC TTGCACGCAG GCAGCTGTGC
GCCACGGCGG CCGCCGCCGC ACTGCTGGCC CTGGCCGGCT GTACCCTGCC ACCCCGCCAG
CTGCAGGCCG ACGCAACCGC CCCCACCGCT GCAGGCCACT GGGCGGGCCG GCTGGCGCTG
CAGGTGGAAG ATGCGCAAAA CCAATCCTTC AGCGCAGGCT TCGAGCTGCT GGGCACCCCC
CAGCGCGGCG AGCTGCTGCT GTTCACGCCC CTGGGCTCGA CACTGGCGCG TCTGCTCTGG
GAACCGGGAC AGGCAAGCTT GCAACAAGGC GAGGAGCGCA AGACCTCGGA CTCGCTACCG
GCACTGGTGC AGGAGCTGAC CGGCAGCGAT CTGCCCATTG CCGCCCTGTT CGACTGGCTG
CAGGGCCGGG CCACCGCAGC CGCAGGCTGG CAGGTCGACC TCTCCCGCAT GGAGCAGGGC
CGCCTGTCCG CCCGGCGCAA TGACCCGCAG CCGCCGGCCG CGCTGCGCAT CGTGCTCGAC
ACACCCTGA
|
|---|
| Protein sequence | MSHRAVPGLP HPALARRQLC ATAAAAALLA LAGCTLPPRQ LQADATAPTA AGHWAGRLAL
QVEDAQNQSF SAGFELLGTP QRGELLLFTP LGSTLARLLW EPGQASLQQG EERKTSDSLP
ALVQELTGSD LPIAALFDWL QGRATAAAGW QVDLSRMEQG RLSARRNDPQ PPAALRIVLD
TP
|
|---|
| |