Gene Daci_5315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5315 
Symbol 
ID5750927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5893960 
End bp5894958 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content70% 
IMG OID641300440 
Producthypothetical protein 
Protein accessionYP_001566329 
Protein GI160900747 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.248972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.736345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCT CCCGCCGCCA ACTGCTGACC GGGGCGCTGC GCGCCGCCGG CGCAGTGACT 
GCCGTTGCCG CCTCGTCGGC CCTGGCTCCG CTGGCCTGGG CACAGCCCGG GCAGGTCATC
CGCATCCTGG TGGGCTTTCC GCCGGGCGGC GGCACGGATG CCATCGCACG CCTGCTGGCC
GACCGGCTCA AGGACGTGCT GGGCACCACG GTGCTGGTGG ACAACCGCCC CGGCGCGGGC
GGGCAGATCG CGGCGCAGCA ACTCAAGGCG GCTGCGGCCG ACGGTCATAC CCTGTTCCTC
ACGCATGACC ACACCATCTC CATCCTGCCC CAGGTGGTGA AGAAGCCGGG TTTCGACCCT
GGCCATGACT TCGTTCCCGT GGCCGGCTTT GCCACCTTCG TGAACGCGCT GGCGGTCTCC
GCCAACACGC CGGCGCGCAA CCTTGCCGAG TATGTGGAGT GGGTGCGCCA GGGCGCAAAG
CGCGGCAGCA TCGGCATACC CGCGCCCGCG TCCACGCCGG AATTCCTGGT CAGGCTGCTG
GGCGAGCACT ACAGGCTGGA CCTGGTGGCC GCGCCCTACC GGGGCAGCGC GCCCATGCTG
GCCGACATGC TGGGCAACCA GATTCCGGCC GGCATCGCCT CGGTGCAGGA CTTCATGGAA
AACCACAAGG CCGGCAAGCT GCGCGTGATC GGCGTGCTGG GCACGCGCCG CCAGGCCACC
ATGCCCGAAG TGCCCACGCT GGCCGAGCAG GGCGTCAAGG GCTTCGAGGA CACGCCCTAC
TACGGCATCT ACGCGCCGCG CGGCACGCCC CAGGCCTTCA TCGACCGCTT CTCCGCCGCA
GTGGCCACCG TGCTCAAACA GCCCGATGTG CACGAGCAGC TCACCGCCCT GGGCCTGACC
GTGGGCCACA TGCCGCCCGC GCAACTGGCC GAGCGCGAGC AGGCCTATAC CCAGGTCTGG
AAACGCATCA TCCAGACCAG CGGCTTCCAG CCGCAGTAA
 
Protein sequence
MTSSRRQLLT GALRAAGAVT AVAASSALAP LAWAQPGQVI RILVGFPPGG GTDAIARLLA 
DRLKDVLGTT VLVDNRPGAG GQIAAQQLKA AAADGHTLFL THDHTISILP QVVKKPGFDP
GHDFVPVAGF ATFVNALAVS ANTPARNLAE YVEWVRQGAK RGSIGIPAPA STPEFLVRLL
GEHYRLDLVA APYRGSAPML ADMLGNQIPA GIASVQDFME NHKAGKLRVI GVLGTRRQAT
MPEVPTLAEQ GVKGFEDTPY YGIYAPRGTP QAFIDRFSAA VATVLKQPDV HEQLTALGLT
VGHMPPAQLA EREQAYTQVW KRIIQTSGFQ PQ