| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5312 |
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| Symbol | |
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| ID | 5750924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5884639 |
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| End bp | 5890623 |
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| Gene Length | 5985 bp |
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| Protein Length | 1994 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300437 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001566326 |
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| Protein GI | 160900744 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.729079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGCTGC TGCTGGGATC GGTGGCGCTG ACGGCGCAGG CCGTGGGCGT GCGCCAGTTC
AGCCCGCAGG GAGAGGTGGC CAAGGTCGAG CAGGTGGTGG TGCAGTTCGA TGGCACGGCC
GTGCGCTTTG GCGACCCCAA GGCGGCCGCG CCGGTCACGC TCAGCTGCAG CGATGCGGCG
GCCACCCAGG GCACGGGCCG CTGGAACAGC GACCGCGAAT GGGTGTTCGA CTTCAAGCAG
GCCCTGCCGC CGGGCGTGCG CTGCACGGCC CAGCTGGTGG CCGGCTACAA GTCGCCTGCG
GGCACGGCCG TGACGGGCGC TGCCAGCTAC CAGTTCCAGA CCGGCGGCCC GGCCGTGCTG
GACATGGCGC CCGACACCTA TGAACAGATC GACGAGGAGC AGTACTTCGC GCTGCGCCTG
TCGGGCCCGG CCACCGTGCA AAGCCTGCAG CAGCACATGT GGTGCACGGC CGAAGGCGTG
GGCGAGCGCA TTCCCGTGCG CCTGATCGAA GGCAAGGAGC GCGACGAGCT GCTCAAGCAC
CGCGGCTGGG ACAAGGCCGC CGCCAAGAAC CCGCTGCAGT ACGCCACGCT GGCCTGCAAC
CGCCGCCTGA CGGCGGGCAC GACCATGAAG CTGGTTTTTG GCGCCGGCAT CGCCACGCCC
AATGGCGTGG CCAGCCGCCA GGACAAGCGC TTCGAGTACC GCGTGCGCGA GCCCTTCGCG
GCCGAGTTCA GCTGCGAGCG CGAGAACGCC CAGGCCGCCT GCCTGCCGAT CCGCCCCATG
CGCCTGAGCT TCAATGCCCC CGTGCCGCGC AAGCTGGCCG AGGGCATTCG CCTGAGCAGC
GGCGCCTCCA AGGTGGCGCC CGTGATCGAC GGCGAATACG GCGAAAAGCT CAGCGAGGAT
TCGCTGGTGC AGAACCTGAG CTTCCCGGCC ACCATGCAGG CCCAGGCGCG CTACACGGTG
GAGCTGCCTC CGCAGTTCAA GGACGCGGCA GGCCGCAGCC TGAGCAATGC CGACATGTTC
CCGCTGCAGG TGGCCACGGG CGCGCTGCCG CCGCTGGCCA AGTTCGCGGC CTCGCCCTTC
GGCATCGTCG AGCGCTATGC CGAAGGCCCG GACGGCCCGG CCCTGCTGCC CGTGACGCTG
CGCAATGTGG AGTCCGAGCT GGCCACCAAG TCCCTGGATG CCAGCCGCGT GAGCACCAAG
CAGCCCGGCA GCGATGCCGA GATCATCGCC TGGATGCGCC GCGTGGCCGA CTACGAGTCC
TCCGACATGG ACCGCAAGCG CGCCTCGCGC GACATCAAGG GCCCGCTGCC GCCCGTGATC
GACAACGAAA ACCGCGACTA TGTGCAGACG CGCATGCTGT CGCTGCTGGC CGGCCAGGGC
GACGTCAAGA CGCTGGAGCT GCCCAAGCCC GTCAAGGGCG ATCCGCGCCC CTTCGAGGTG
GTGGGCATTC CGCTCACGCC GGGCTTTCAC GTGGTCGAGA TCGCCTCGCC GCTGCTGGGC
CAGTCGCTGC TCGATGAGCG CTACGGCTCG GCACGCAGCA TGTATGTGCG CACCTCCGCC
CTGGTGACCA ATTTGTCCGT GCACTTCAAG CTCGGCCGCG AGAACGCGGC CGCCTGGGTG
ACCACGCTGG ACAAGGGCCA GGTCGTGGCC AATGCCAGGA TCCAGGTCTC CGACTGCAAT
GGCAAGGTGC TGACCTCGGC CACCACCGAT GCCAGCGGCG TGGCGCGCCT GGACGGCCTG
TCGCCCGAGC CGCCCCAGTG CACGGGCGGT GTCGGCTACC GCTCGCCGGC CTACTTCGTC
AGCGCACGCG CCCAGGGCAA GGACGGCCAG CAGGAGCTGG CCTTCACCTG GAGCGACTGG
CAGCGCGGCA TCGAGTCCTG GCGCTTCAAC GTGCCCACCA GCCGCAGCGC CCAGCGCGAC
GAGGTGGCCC ACACCATCTT CGACCGCACG CTGCTGCGCG CCGGCGAGAC CGTGTCCATG
AAGCACCTGA TGCGCACCCA GACCGGCATC GGCCAGGGGC AGGGCGGCTT TGCGCTGCCC
GAGCAGCGGC CCACGCAACT GGTCATCACC CATGAAGGCA GCGGCCAGCA GTACACGCAG
CCGCTGCAGT GGCGTTCCAC GGGCACGGGC GGCCTGAGTG CGGAAAACAG CTTCTCCGTG
CCCAAGGGTG CCAAGCTCGG CTCGTATTCC GTGGAGCTGC GCGGCGATGG CAACGGCTCG
CGCGGGCGCA ACAACCGCTT CGGCACGGGC AGCTTCCGTG TCGAGGAATT CCGCCTGCCC
GTGCTCGAAG GCCGTGTGGG CCCCGAAGGC AAGCAGGCCC TGGTCGGCGT CTCCAGCCTG
CCGGTGCAGG TGCAGGTGAA CTACGTCTCC GGCGGCCCGG CCGCCAACCT GCCGGTGCGC
GTGTCCGCCC TGGTGCGCTC CACCTGGATG GACCGCAGCG ACTGGCAGGG CTTCAGCTTC
TCGGCACCGC GCAGCGCCCA GGACACGGGC CAGAGCGATG ACGAGGAGGC CACGGCCTCA
CAGGACAGCA AGGTGGTGGC CGACAAGCTG CCCGTGACGC TGGACCGTGA AGGACTGGGC
AAGCTCAAGA TCGAGAACCT GCCCAAGCTG CGCGAGCCGC GCGAGCTGCT GATCGAGGCC
ACCTATGCCG ATCCCAACGG CGAGGTGCAG ACCCTGCGCA GCACGCAGAT GCTGTGGCCC
GCGGCCATCG TGGCCGGCGT GCGCGCCGAA AGCTGGATCA CCACGGGCCG CAAGCTGCAG
TTCCAGGCGC TGGCCCTGGG CGTGGACGGC AAGCCCCAGG CCGGCGTGCC GGTCAAGGTC
GAGGCCATCT CCCGCGTCAC CACCAGCAGC CGCAAGCGCC TGGTGGGGGG CTTTTACAGC
TACGACAACC AGACCACGCT CAAGTCCATG GGCACGGTGT GCACGGGCAA CAGCGATGCC
CAGGGCATGG TGCAGTGCGA GGCCCAGCTG TCGCAGCCCG GCGAGGTCGA GCTGATCGTC
ACCGCCTCCG ACAAGGACGG CCGGCCCGCC CAGGCTGCCT CCAGCGTCTG GGTCACGCGC
CAGGGCGAAC TGTGGTTCGG CGGCGAGGAC CATGACCGCA TGGACGTGCT GCCCGAAAAG
CGCAGCTACG AGCCCGGCGA GACCGCGCGC TTCCAGGTGC GCATGCCCTT CCGCTACGCG
ACGGCCCTGG TCGCCGTGGA ACGCGAAGGC ATCGTCAGCA CCCAGGTCAT GCAGCTCAAT
GGCCAGAACC CCACCGTGGA GCTGAAGGTC CAGCCCGACT GGGGCCCCAA CGTCTACGTG
AGCGTGCTGG CCCTGCGCGG GCGACTGCGC GAGGTGCCCT GGTACAGCTT CTTCACCTGG
GGCTTCAAGG CGCCGCGCGA GTGGTGGAAC GCCTTCTGGC ACGAGGGCAA GGAGTACATC
GCGCCCACGG CCCTGGTCGA TCTGTCCAAG CCCGCTTACC GCCTGGGCAT GGCCGAGATC
CGCGTGGGCA CCAAGGCCCA TCGCATCGAC GTCAAGGTCA CGGCCGACCA GGCCAGCTAC
CAGGTGCGCG GCACCGCCAA GGTCACCATC AGCGCCACGC TGCCCGACGG CAAGCCCGCC
GCTGGCGCCG AGGTGGCGCT GGCGGTCGTG GACCAGGCCC TGCTGGAGCT CATGCCCAAC
ACCAGCTGGC AGCTGGCCGA CGCGATGCTG CGCCGCCGCG AGTGGGGCGT GCAGACCTCG
ACCGCGCAGA TGGAGGTGAT CGGCAGGCGC CACTACGGCC GCAAGGCCGT GGCCGCTGGC
GGCGGCGGTG GCCGCAGCCA GACGCGCGAG CTGTTCGAGA CGCTGCTGCT GTGGAATCCG
AGTGTGGTGC TCGATGCCCA GGGCAAGGCC CAGGTCAGCG TGCCGCTCAA CGACTCGCTG
ACCACCTTCC AGGTGGTGGC GGTGGCCGAC CATGGCGTGT CGATGTTCGG CACGGGCCAG
GCGCCCATCC GCACGGCCCA GGACCTGCAG ATCATCAGCG GCCTGCCGCC GCTGGTGCGC
GAGGAGGACC AGTTCCGTGC CATGGTCACG CTGCGCAACA CCTCGGCCAA GGCCATGAAG
GTGCAGGTCA CGCCGCGTGC CACGCTGCTG GAGCTGGCAG CGCAGACCGT GGAGATTCCC
GCGGGCGAGG CGCGCGAGGT GGCCTGGAAC GTCACGGCGC CGGCCCAGCT GGGCCAGACG
CGCGCCGAGG CGCTGATCTG GGAGATCGAG GCCCGCGACA CCGCAGGCGG CGACAAGCCG
GCCAGCGACA GGCTGAAGGT CAGCCAGCGC ATCATCCCGG CCGTGCCGCT GACGGTGCAG
CAGGGCACGC TGATGCAGGT CGATGGCAGC ATCAACCTGC CCGTGCAGCT GCCGGCCGAT
GCACTGTCCG GCCGGGGCGG CCTGCGCATG TCGCTGGCGC CCAAGCTGGC CGAAGGCCTG
CCCGGCGTGC GCGACTGGTG GGCGCGCTAT CCCTACAGCT GCCTGGAGCA GGTCACCAGC
AAGGCCGTGG GCATGAGCGA CGCCACGCTG TGGCAGTCCA CGATGGGCCA GCTGCCCAGC
TACCTGGACG GCGACGGCCT GGCCAGCTAC TTCCCGCTGG CAGGCGACGG GTCGGGCCGT
GCGGCTCGCG GCAGCGATAC GCTGACGGCC CACCTGCTCA ACCTCTCGGC ACTGGCGCAG
GGCGTGGACA AGCGCTTCGT GCTGCCGGCG GCCGAGCGCG AGCGCATGGA AAACGGTCTG
ATCGCCTTCG TCGAAGGCCG CATCCAGCGC AGCTTCTGGA GCCCGCGCAA GGATCTGGAC
ATGCGCAAGC TGGCCGCCAT CCAGGCGCTG GCGCTGACGG GCCGCGCCAA TCCGCGCATG
CTCGACAGCA TCACCATCGC GCCCAACGAC TGGCCCACGC ATGCCGTCAT CGACTGGGTG
GCCCTGCTCA AGCACATGCG CGAGCTGCCC CAGCGCGAAC AGCAGCTGGC CCAGGCCCAG
CAGATCCTGC GCGCCCGCCT GAGCTACCAG GGCACGCGCG TGGCCTTCAG CAACGAGCAG
GACGACCAGT GGTGGTGGCT GATGCAGGGC CCCGAGGTCA ACCTGGCCCG CCTGATGCTG
GTCAACATGG ACGACCCGAC GTGGAAGGAA GAGCTGCCGC GCCTGGCCAA CGGCTTCATC
TCGCGCCAGA GCAACGGCGC CTGGGGCACG ACCACGGCCA ACCTGTGGGG GGCGCTGGCA
CTGCAGCGCT TCTCGCAGCA GTTCGAGGCC ACGCCCGTGA CGGGCGCCAC CCAGGCGGCT
TTGGGCGCGT CCCAGGCCCG CGTGGAGTGG AGCCAGGTCA CGCGCATGCG CGCCAGCGAC
ACCGAGGGCG CGGCCCACCA GGCGTCCAGC TTCGGCGCGA CCACGGTGGT CGGCGGCCTG
CGCAACAACA CCATGTTCCT GCCCTGGAGC GCGGTGGGTG ATGCCCGCAA GGGCCAGCTG
ACGGTGACCC AGCAGGGCAC CGGCAAGCCC TGGCTCACGC TGCAGTCCGT GGCGGCCGTG
CAGCTCAAGG CGCCGTTCAG CGCCGGCTAC ACCGTCACGC GCACGGTCAA GCCCGTGGAG
CAGGCCGACA AGAGCCTGCC CGCAGGCCAG TACTCGCGCG GCGACGTGCT GCGCGTCACG
CTGGAGGTGC AGGCCCGCAC CGACATGACC TGGGTGGCCA TCACCGACCC CGTGCCCACG
GGCGCCACCA TCCTGGGCGG CGGTCTGGGG CGCGACTCGG AGATCGCCTC GGGCGGCGAG
CGCGCGGAAG GCGCGGGCTG GCTGGCTTAT GAAGAGCGCA GCTTTGAGGC CTACCGCGCC
TACTACCAGT ACCTGCCCAA GGGCAATACG CGCGTGGAGT ACACCGTGCG GCTGAACAAT
GCCGGCGACT TCGCGCTGCC GCCCACGCGG GTGGAGGCGC TGTATGCGCC CGAGATGTTC
GGCGAGGTTC CCAACGCCCG CATCAAGGTG AGCGACAAGC GCTGA
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| Protein sequence | MGLLLGSVAL TAQAVGVRQF SPQGEVAKVE QVVVQFDGTA VRFGDPKAAA PVTLSCSDAA
ATQGTGRWNS DREWVFDFKQ ALPPGVRCTA QLVAGYKSPA GTAVTGAASY QFQTGGPAVL
DMAPDTYEQI DEEQYFALRL SGPATVQSLQ QHMWCTAEGV GERIPVRLIE GKERDELLKH
RGWDKAAAKN PLQYATLACN RRLTAGTTMK LVFGAGIATP NGVASRQDKR FEYRVREPFA
AEFSCERENA QAACLPIRPM RLSFNAPVPR KLAEGIRLSS GASKVAPVID GEYGEKLSED
SLVQNLSFPA TMQAQARYTV ELPPQFKDAA GRSLSNADMF PLQVATGALP PLAKFAASPF
GIVERYAEGP DGPALLPVTL RNVESELATK SLDASRVSTK QPGSDAEIIA WMRRVADYES
SDMDRKRASR DIKGPLPPVI DNENRDYVQT RMLSLLAGQG DVKTLELPKP VKGDPRPFEV
VGIPLTPGFH VVEIASPLLG QSLLDERYGS ARSMYVRTSA LVTNLSVHFK LGRENAAAWV
TTLDKGQVVA NARIQVSDCN GKVLTSATTD ASGVARLDGL SPEPPQCTGG VGYRSPAYFV
SARAQGKDGQ QELAFTWSDW QRGIESWRFN VPTSRSAQRD EVAHTIFDRT LLRAGETVSM
KHLMRTQTGI GQGQGGFALP EQRPTQLVIT HEGSGQQYTQ PLQWRSTGTG GLSAENSFSV
PKGAKLGSYS VELRGDGNGS RGRNNRFGTG SFRVEEFRLP VLEGRVGPEG KQALVGVSSL
PVQVQVNYVS GGPAANLPVR VSALVRSTWM DRSDWQGFSF SAPRSAQDTG QSDDEEATAS
QDSKVVADKL PVTLDREGLG KLKIENLPKL REPRELLIEA TYADPNGEVQ TLRSTQMLWP
AAIVAGVRAE SWITTGRKLQ FQALALGVDG KPQAGVPVKV EAISRVTTSS RKRLVGGFYS
YDNQTTLKSM GTVCTGNSDA QGMVQCEAQL SQPGEVELIV TASDKDGRPA QAASSVWVTR
QGELWFGGED HDRMDVLPEK RSYEPGETAR FQVRMPFRYA TALVAVEREG IVSTQVMQLN
GQNPTVELKV QPDWGPNVYV SVLALRGRLR EVPWYSFFTW GFKAPREWWN AFWHEGKEYI
APTALVDLSK PAYRLGMAEI RVGTKAHRID VKVTADQASY QVRGTAKVTI SATLPDGKPA
AGAEVALAVV DQALLELMPN TSWQLADAML RRREWGVQTS TAQMEVIGRR HYGRKAVAAG
GGGGRSQTRE LFETLLLWNP SVVLDAQGKA QVSVPLNDSL TTFQVVAVAD HGVSMFGTGQ
APIRTAQDLQ IISGLPPLVR EEDQFRAMVT LRNTSAKAMK VQVTPRATLL ELAAQTVEIP
AGEAREVAWN VTAPAQLGQT RAEALIWEIE ARDTAGGDKP ASDRLKVSQR IIPAVPLTVQ
QGTLMQVDGS INLPVQLPAD ALSGRGGLRM SLAPKLAEGL PGVRDWWARY PYSCLEQVTS
KAVGMSDATL WQSTMGQLPS YLDGDGLASY FPLAGDGSGR AARGSDTLTA HLLNLSALAQ
GVDKRFVLPA AERERMENGL IAFVEGRIQR SFWSPRKDLD MRKLAAIQAL ALTGRANPRM
LDSITIAPND WPTHAVIDWV ALLKHMRELP QREQQLAQAQ QILRARLSYQ GTRVAFSNEQ
DDQWWWLMQG PEVNLARLML VNMDDPTWKE ELPRLANGFI SRQSNGAWGT TTANLWGALA
LQRFSQQFEA TPVTGATQAA LGASQARVEW SQVTRMRASD TEGAAHQASS FGATTVVGGL
RNNTMFLPWS AVGDARKGQL TVTQQGTGKP WLTLQSVAAV QLKAPFSAGY TVTRTVKPVE
QADKSLPAGQ YSRGDVLRVT LEVQARTDMT WVAITDPVPT GATILGGGLG RDSEIASGGE
RAEGAGWLAY EERSFEAYRA YYQYLPKGNT RVEYTVRLNN AGDFALPPTR VEALYAPEMF
GEVPNARIKV SDKR
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