| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5131 |
|---|
| Symbol | |
|---|
| ID | 5750742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5684986 |
|---|
| End bp | 5687010 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641300255 |
|---|
| Product | DNA mismatch repair protein MutL |
|---|
| Protein accession | YP_001566145 |
|---|
| Protein GI | 160900563 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
|---|
| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCAT CCATCCCCTC CTCCGACACC CTCCCCCGCC GCCCCATCCG CGACCTGCCC
GACGAGCTGA TCAGCCAGAT CGCGGCCGGC GAAGTCGTCG AGCGCCCTGC CTCGGTGGTG
CGCGAACTCG TGGACAACGC CCTGGATGCG GGCGCCCGCC AGATCAACGT GCGGCTGCTG
GCCGGCGGCG TGCGGCTGAT CTCGGTGGAG GACGACGGCG GCGGCATCCC GCGCGATGAG
CTGCCCGTGG CATTGCGCCG CCATGCCACC AGCAAGATCA CCGATCTGCA CGACCTGGAG
ACCGTGGCCA CCATGGGCTT TCGCGGCGAG GCGCTGGCGG CCATCTGCTC GGTGTCCGAG
GCGTCCATCC TCTCGCGCCC TGCGGGCCAG GACTCGGCCT ATCTGCTCGA TGCGCGCAGC
GGCGAGCTGC GCCCCGCCGC CCGCAACCAG GGCACGACGG TCGAGGTCAA GGAGCTGTTC
TTCTCCACCC CGGCCCGCCG CAAATTCCTC AAGAGCGACG CCACGGAGCT GGCCCACTGC
ATCGAGTCCG TGCGCCGCCA TGCGCTGGCC CGGCCCGACG TGGGCTTTGC CATCTGGCAC
GAAGGCAAGC TGGTCGAGCA GTGGCGTGCC GCAGGCAGCA TGTCGGATGA AGCCCTTGCG
CGCCGCCTGG GCGATGTGCT GGGCGACGCC TTCGTGCAGA ACTCCGTGAC GGTGGAGCAC
TGGTCGGGCG CCGTCCACGT CACGGGCCGC GCGGGCATTC CCGATGCGGC GCGCTCCCGG
CCCGACCACC AGTTCTGCTA CGTCAATGGC CGCTTCGTGC GCGACAAGGT GCTGACACAC
GCCTCGCGCA GCGCCTACGA GGATGTGCTG CACGGCCACA AGCAGCCTGT CTATGCGCTG
TATGTGGAGA TCGACCCTGC GCGCGTGGAC GTGAACGTGC ACCCCACCAA GATCGAGGTG
CGCTTTCGCG ACAGCCGCGA GGTGCACCAG GCCGTGCGCC ACGCCATAGA GAATGCGCTG
GCCGCCCCGC GCGCGGCCGC CGCAGCCGCC GCTGCCGCCG AGGAAGCCGC CCGCACCCCG
GAGCTGGCCC CCGCCGCACC GGCCACCGCG CCCAAGGTGG CGGCTCCCGC CTGGCCCCAG
GCGCGCATGA GCTTTGGCGA TGAACAGGGC GGCCACAAGG TCAGCAACAT GGCGGGCCTG
TGGGCACCCA TGCGCGAAGC CGCGCCGGCC CCCGTGGCAC TTCCTGCCCA GACGGCCATG
CAGACTGCCG GTGCCGCCGA AGTCGCGGTG GACACGCCCG GCGTGCAATG GCCTGCCGGC
GATGTGCCCG CCAGCTACGC ACCCGCCGCA CAGCCCCGGC CAGTCACCGT CTCCGAACCT
TCACCTGCGA ACTTCACGCC CCCGGCAGCG GACACCCCTG CCGCTGCCGA AGAAACCATC
TGGCCCCTGG GCCGCGCCGT CGCCCAGATC CACGGCGTCT ACATCCTGGC CGAGAACGCC
CAGGGCATGG TGGTGGTGGA CATGCATGCG GCGCACGAGC GCATCGTCTA CGAGCAGCTC
AAGAATGCCG TCAACGCGGC AGAGCAGATC CCCAGCCAGC CGCTGCTGAT TCCCGCCACC
TTCGCCGCCA CGCCCGAGGA AGTGGCCACG GCCGAGGCCC ATGGCGACAC GCTGCAGGCC
CTGGGCATGG AGGTTTCCCC CTTCTCGCCC AAGACGCTGG CCGTGCGTGC CGTGCCCGCC
ACCCTGGCCC AGGGCGATGC CGTGGAGCTG GCGCGCAGCG TGCTGGCCGA GCTGGCCCAG
CACGACGCCA GCACCGTGGT GCAGCGCGCG CGCAATGAGA TCCTGGCCAC CATGGCCTGC
CACGGCGCCG TGCGCGCCAA CCGCCGCCTG ACGCTGGACG AGATGAACGC CCTGCTGCGC
CAGATGGAAG TCACCGAGCG CTCCGACCAA TGCAACCACG GCCGCCCCAC CTGGCGGCAG
ATGAGCATGA AGGAATTGGA CGCGCTGTTC CTGCGCGGTC GCTGA
|
|---|
| Protein sequence | MNASIPSSDT LPRRPIRDLP DELISQIAAG EVVERPASVV RELVDNALDA GARQINVRLL
AGGVRLISVE DDGGGIPRDE LPVALRRHAT SKITDLHDLE TVATMGFRGE ALAAICSVSE
ASILSRPAGQ DSAYLLDARS GELRPAARNQ GTTVEVKELF FSTPARRKFL KSDATELAHC
IESVRRHALA RPDVGFAIWH EGKLVEQWRA AGSMSDEALA RRLGDVLGDA FVQNSVTVEH
WSGAVHVTGR AGIPDAARSR PDHQFCYVNG RFVRDKVLTH ASRSAYEDVL HGHKQPVYAL
YVEIDPARVD VNVHPTKIEV RFRDSREVHQ AVRHAIENAL AAPRAAAAAA AAAEEAARTP
ELAPAAPATA PKVAAPAWPQ ARMSFGDEQG GHKVSNMAGL WAPMREAAPA PVALPAQTAM
QTAGAAEVAV DTPGVQWPAG DVPASYAPAA QPRPVTVSEP SPANFTPPAA DTPAAAEETI
WPLGRAVAQI HGVYILAENA QGMVVVDMHA AHERIVYEQL KNAVNAAEQI PSQPLLIPAT
FAATPEEVAT AEAHGDTLQA LGMEVSPFSP KTLAVRAVPA TLAQGDAVEL ARSVLAELAQ
HDASTVVQRA RNEILATMAC HGAVRANRRL TLDEMNALLR QMEVTERSDQ CNHGRPTWRQ
MSMKELDALF LRGR
|
|---|
| |