Gene Daci_5079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5079 
Symbol 
ID5750690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5628024 
End bp5629493 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content67% 
IMG OID641300203 
Producthypothetical protein 
Protein accessionYP_001566093 
Protein GI160900511 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.921334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0721904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCAT TTGACGAGAT GTACACGATG ACGCCGTTCG ACGGCAGCGA TGTGCGCCTG 
CACTACAAGG ACTACGCGCA ATGGCTTGCG CGCCAGTCCG AACAGACGCT GCGAGCGCGC
AGCGCCGAGG CCGAGATCAT CTTCCGGCGC GTCGGCATCA CGTTCGCCGT CTACGGCGAC
AAGGACGAAA GCGGCGCCGG CAACGAGCGC CTCATCCCCT TCGACCTGAT ACCGCGCGTC
ATTCCCGCAC ATGAGTGGTC GCGAATGCAG GCGGGCCTGG TGCAGCGCGT GACGGCGCTC
AACCGCTTCC TGCACGATGT CTATCACGAC CAGGAGATCC TGCGCGCGGG CCTGGTGCCG
CGCGAACTGG TGCTGAACAA CAGCCAGTAC CGGCCCGAGA TGCGGGGCCT GGCGGTGCAG
GGCGGCATCT ACGCCCACAT TGCCGGCATC GACATCGTGC GCGCCGCCAA TGCCCAGGGC
GAGGGCGTGT ACTACGTGCT GGAGGACAAC CTGCGCGTGC CCTCGGGCGT GTCGTACATG
CTGGAGAACC GGCGCATGAT GATGCGGCTG TTCCCGGACC TGTTCTCGCG CCATCCCGTG
GAGCCCGTGG CCCACTATCC CGACATGCTG CTGGAGACGC TGCGCGCCAG CGCGCCGGCC
GGCACGCCCG AGCCCACGGT GGTGGTGCTG ACGCCCGGCA TGCACAACAG CGCCTACTTC
GAGCATGCCT TCCTGGCCCA GCAAATGGGT GTGGAGCTGG TCGAGGGCCA GGACCTGGTG
GTGGACAAGG ACGTGGTCTA CATGCGCACC ACGCGCGGCC CGCAGCGCGT GGACGTGATC
TACCGGCGCG TGGACGATGA TTTTCTCGAC CCCGAAGTCT TTCGCCCCAC CTCCACGCTG
GGCTGCCCCG GCCTCATGCG CGCCTACCGT GCCGGCAACG TGAGCATCTG CAATGCAGCG
GGCACGGGTG TGGCCGATGA CAAATCGGTC TACCCCTATG TGCCGGAGAT GATCCGCTTC
TACCTGGGCG AGGAACCCAT CCTGCAGAAC GTGCCGACCT GGCTATGCCG CAAGCCCGAT
GATCTGCGCT ACGTGCTCGA CCACCTGGAC GAGTTGGTGG TCAAGGAAGT CCACGGCGCC
GGTGGCTACG GGATGCTGAT CGGGCCTGCC GCCTCGCGCG GCGAGATCGA GGATTTCCGC
CGCGCGCTCA TCGCCAATCC CGGCGGCTAT ATCGCGCAGC CCACGCTGGC GCTGTCCACC
TGCCCCACCC TGGTGGAGCA GGGCATCGCA CCAAGGCACA TCGATCTGCG GCCCTTCGTG
CTCAGCGGCA ACCAGGTGCG CATGGTGGCC GGCGGCCTCA CGCGCGTGGC GCTTAAGGAG
GGCTCGCTGG TGGTCAATTC ATCACAGGGC GGCGGCACCA AGGACACCTG GGTGCTCGGG
GCCGGTGAGT CAAACGAGGG AGGACATTGA
 
Protein sequence
MHPFDEMYTM TPFDGSDVRL HYKDYAQWLA RQSEQTLRAR SAEAEIIFRR VGITFAVYGD 
KDESGAGNER LIPFDLIPRV IPAHEWSRMQ AGLVQRVTAL NRFLHDVYHD QEILRAGLVP
RELVLNNSQY RPEMRGLAVQ GGIYAHIAGI DIVRAANAQG EGVYYVLEDN LRVPSGVSYM
LENRRMMMRL FPDLFSRHPV EPVAHYPDML LETLRASAPA GTPEPTVVVL TPGMHNSAYF
EHAFLAQQMG VELVEGQDLV VDKDVVYMRT TRGPQRVDVI YRRVDDDFLD PEVFRPTSTL
GCPGLMRAYR AGNVSICNAA GTGVADDKSV YPYVPEMIRF YLGEEPILQN VPTWLCRKPD
DLRYVLDHLD ELVVKEVHGA GGYGMLIGPA ASRGEIEDFR RALIANPGGY IAQPTLALST
CPTLVEQGIA PRHIDLRPFV LSGNQVRMVA GGLTRVALKE GSLVVNSSQG GGTKDTWVLG
AGESNEGGH