Gene Daci_5078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5078 
Symbol 
ID5750689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5627055 
End bp5628023 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID641300202 
Producthypothetical protein 
Protein accessionYP_001566092 
Protein GI160900510 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0605764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCC GTACTGCCGA TCATCTGTAC TGGATGTCCC GCTACACGGA GCGTGCGGAG 
AACACCGCCC GCATGCTCAA CGTCTCCTAT GACACCTCCA TGCTGCCCCA GGCGCCGCAG
GTGGCGCGCA AGGCCTGGCA GGGCGTGCTG TCCATCAGCG AGCTGATCCC CTCCTACGCC
GCCCGCCACG GCGAGGTGCA GCGCGAGGCC GTGCTGCACT TCATGGTGCG CGACGAGAGC
AACTCCTCGT CCATCGCCTC CTGCCTGCGC GCTGCGCGGG AGAACGCGCG CGCCGTGCGC
GGCGCCCTGA CTACCGAGGC CTGGGAGACC CAGAACCAGA CCTGGCTGGA GCTCAAGCGC
CTGCTGGCCG AGGGCGACTG GGAGCGCGAT CCGGGCCAGT TCTTCGAATG GGTCAAGCAC
CGCTCGCACC TGTCGCGCGG CGTGACGCTG GGCACCATGC TGCAGGACGA GGCCTTCCAC
TTCCTGCGCC TGGGCACCTT CATCGAGCGC GCCGACAACA CGGCACGCCT GCTGGACGTG
AAGTTCCACG CCATCGAGCG CGACTACCAC GGCAGCGCAC GCAACGGCGC ATCGGGCAAG
GCGGCCACGC CGTTCGACTT CTACCACTGG AGCGCGCTGC TGCGCAGCGT CTCGGCCTTC
GAGGTCTACC GCAAGGTCTA CCGCGACGTG ATCACGCCCG AGCGCGTGGC CGAGCTGCTG
ATGCTGCGCA GCGACATGCC GCGCTCGCTG CTGGCCAGCA TGCTGGAGGT GGTGGCCAAC
CTGGAAAGCG TGGCCAACGC CCAGTCGCGC GAGACCCAGC GCAAGGCAGG CCGCCTGCTG
GCCGACCTGC GCTATGCGCG CATCGACGAA ATCCTGGCCA CGGGCCTGCA CGCCTATCTC
ACGCAGTTCC TGGACCGCGT GCACGACCTG GGCCAGGGCA TCAGCCGGGA CTTTCTGGTG
CCCGCCTGA
 
Protein sequence
MLSRTADHLY WMSRYTERAE NTARMLNVSY DTSMLPQAPQ VARKAWQGVL SISELIPSYA 
ARHGEVQREA VLHFMVRDES NSSSIASCLR AARENARAVR GALTTEAWET QNQTWLELKR
LLAEGDWERD PGQFFEWVKH RSHLSRGVTL GTMLQDEAFH FLRLGTFIER ADNTARLLDV
KFHAIERDYH GSARNGASGK AATPFDFYHW SALLRSVSAF EVYRKVYRDV ITPERVAELL
MLRSDMPRSL LASMLEVVAN LESVANAQSR ETQRKAGRLL ADLRYARIDE ILATGLHAYL
TQFLDRVHDL GQGISRDFLV PA