| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5070 |
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| Symbol | |
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| ID | 5750681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5616811 |
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| End bp | 5619099 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300194 |
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| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
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| Protein accession | YP_001566084 |
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| Protein GI | 160900502 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.565094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.157746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTACG ACTTCGCAAT GCAATCAAGC GCCCGGCGGG CGCGCCATCC CCTGGCCGCC
GCCTGCGCGC TGCTGTGCGC CTCCGCTGCC CTGGCCCAGG AGCCGGGGCA GGCCGCCGCA
GACGCCGCAG ACGTTGCAAA TGCCGGAGAT GCCGACACGC AATTGCTGGC GCAGGCCGCG
TCCGGGGCAC GGACCCGTGC CCCGGCCCTC AAGGAGATGG TGATCAGCGC CTCGCGCGAG
GTGCAGGACC CTGACACCCT GCCCATGAGC ATCGACGTGA TCGACGCCGG CCGCATGGAA
CGCGAGCAGG CCAGCGACAT CCGCGAGATG GTCAACCTGC TGCCCAATGT CGAGGTGCCG
CGTGCCCCGG CGCGCTTCTC GCTGGCGGCC TCTCCGGCCG GGCGTGACCA GAACAGCGGC
TTCAACATCC GTGGCCTGGA TGGCAACCGC GTGCTCATGC TGGTCGATGG CGTGCGCCTG
CCGCGCAGCT ACAGCTTCAG CGCCAACAGC TTCGGCCGCG ACTACCTGGA CCTGGGCCTG
GTGCAGCGCG TGGAAATCCT GCGCGGCTCC ACGCCCGCGC TGTATGGATC GGACGGCATG
GGCGGCCTGG TCAACTTCGT GACCGTGCAG CCGGACGATC TGCTGGGCAA GGACAAGCGC
ATAGCCGGCC GCGTGGCTGC CGGCTATGAC GGCTCGGACA ACGGCCGCAA GCTGGGCGCC
ACCGTGGCGG GCCGTGCCAG CCCCGAATGG GCATGGCTGC TGTCGGCGGG CCTGGGCCGC
TCGCACGCGC TGGAGAACAT GGGCACGAAC AACGTGACGG GCGCGGCGCG CACCACGCCC
AATCCCGAGA AAGACCGCAG CGAATCGCTG ATGGGTCGCC TGGTCTTCAC GCCCAGCGCC
GTGCAAAAGC ATGTCTTCAC CTTCGAGAAC GTGGACAAGC GCGCCGACTA CGCCCTGCTG
TCCGCGCGCT CGGCTACCGT GGCCAATTCC GACTCGCGCA CCGACATGAA GCGCTGGCGG
GCCAGCTGGC AGGGCCAGTG GCAGCAGCTG GGCACGGCGC TGGCCGACGA ACTGCAGCTG
ATGGCCAGCT ACCAGAAGTC CGACGCGCGC GAATTCGTCA CCGAGACGCG CATCGGCCTG
CCCTACCGCG AGCGCGACGT GACCTATGAC GAGGACGCGA TCCAGCTGCA CGCCCAGGCC
AGCCGCCTGC TGCGCTGGAG TTCTTCGGCC AGCGGCAAGT TCACCTACGG GCTGGACTAC
CTCCGCAACA AGGTGGTCAA CGCGCAAAAC GGCATCACGC CGCCCGTGGG CGAGAGCTTC
CCGCTCAAGC GCTTCCCCGA CACCACCGAA AGCGCCACCG CCCTGTTCGC CCAGGCCGAA
CTGCACAACG GCCCCTGGAG CGTGACCCCG GGCCTGCGCG CCGAGCACTA CAGCATCAAG
CCCCGGCAGA GCGGCTTTGT GCCCGCCGTG GTCAGCAACT CGGACTCCGC GCTCTCGCCC
AAGCTGGGCG TGATGCTGCA GGCCAGCCCG GTCTGGTCCG TCTATGGCAA CTATGCGGCA
GGTTTCCGGG CGCCCAATGC CGGCCAGATC AACGCCTTCT TCGAGAACCC GGTGGCGTTC
TACCGCAACA TCCCGAATCC CAACCTGCGG CCCGAAAAGA GCCAGACCTT CGAGCTGGGC
CTGCGCGGGC GCCTGGACAG GCTGCGCCTG GACGCCGCCG TGTTCACGGG GCGCTACAAG
GACTTCATCG TCGACCAGCA GTTGGTTGCG GGCCAGCCCG GCAACGCGGC CAACCCCGCC
ATCTACCAGT CCATCAACGT GGGCCGCGCC CGCATCAGCG GCTTCGAACT CAAGGCCGAT
TACGACTGGG GCCGCTGGGC CGGCGGCGAC TGGCAGACGC GCCTGGCCTA CGGCTATACC
GACGGCAAGG ACACGCAGTC CGACAAGCCG CTGGACACCA TCTCGCCCCA GCAACTGGTG
CTGGGCGTGC GCTATGAGCG CTCTGCCGTG GGCGTGCAGT TCAACGTCTC GCACTGGAGC
GGCAAGAAGG CCGGCGACGT GTCCAACGGC AGCGCCGCCT GGCTCAGCCC CTCGGCCACC
GTGGCCGACC TGAGTGCCCA GTGGCGCATA CGCCCCGACC TGCGCCTGAA CGCCGGCATC
TACAACCTGA CCGACAAGAA GTATTGGCGC TGGGCCGATG TGCGCGGCCT GGCTGCCAGC
ACGGCGATTG CCGACGCCTA CAGCCAGCCC GGCCGCCATG TGCGGGTGTC GATGGTCAAG
GATTTCTGA
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| Protein sequence | MAYDFAMQSS ARRARHPLAA ACALLCASAA LAQEPGQAAA DAADVANAGD ADTQLLAQAA
SGARTRAPAL KEMVISASRE VQDPDTLPMS IDVIDAGRME REQASDIREM VNLLPNVEVP
RAPARFSLAA SPAGRDQNSG FNIRGLDGNR VLMLVDGVRL PRSYSFSANS FGRDYLDLGL
VQRVEILRGS TPALYGSDGM GGLVNFVTVQ PDDLLGKDKR IAGRVAAGYD GSDNGRKLGA
TVAGRASPEW AWLLSAGLGR SHALENMGTN NVTGAARTTP NPEKDRSESL MGRLVFTPSA
VQKHVFTFEN VDKRADYALL SARSATVANS DSRTDMKRWR ASWQGQWQQL GTALADELQL
MASYQKSDAR EFVTETRIGL PYRERDVTYD EDAIQLHAQA SRLLRWSSSA SGKFTYGLDY
LRNKVVNAQN GITPPVGESF PLKRFPDTTE SATALFAQAE LHNGPWSVTP GLRAEHYSIK
PRQSGFVPAV VSNSDSALSP KLGVMLQASP VWSVYGNYAA GFRAPNAGQI NAFFENPVAF
YRNIPNPNLR PEKSQTFELG LRGRLDRLRL DAAVFTGRYK DFIVDQQLVA GQPGNAANPA
IYQSINVGRA RISGFELKAD YDWGRWAGGD WQTRLAYGYT DGKDTQSDKP LDTISPQQLV
LGVRYERSAV GVQFNVSHWS GKKAGDVSNG SAAWLSPSAT VADLSAQWRI RPDLRLNAGI
YNLTDKKYWR WADVRGLAAS TAIADAYSQP GRHVRVSMVK DF
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