| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5061 |
|---|
| Symbol | |
|---|
| ID | 5750672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5607198 |
|---|
| End bp | 5607722 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641300185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001566075 |
|---|
| Protein GI | 160900493 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.334785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTG TGAAAACGTC CGCCGGCCAA CAGGCATTCA AGGAACGCCA TGCCGACCTC
TCGCCCCGGT TGCGCTCGGC CTTTTTGCTG TTTGACGGGC AACGCAGCCT GGCGCAGGTG
CTGCAGGCCG TGGCCGGCAT GGGCGTGACG CAGGACGAGA TCTTGGCGCT GGTGGAGCGC
GAATGGCTGG CACCGCGCGA CGCGGCCGAG CCCCGGCTGG GCGTGGTGGC CGTCGCGGTG
CCTTCGGTCC CTGCCGCGCC TGCTGCAGCG GCTTCGTCCA CGGATTCGGC AGGCGATGCG
CCCGCGCAGT CCGAGCCATC GCTGGCCGTG CGCTATCGCA ACGCCTATCC GCTGGCCGTG
GCCATCACGG CCAACCTGGG CCTGAAGGGG TTCCGGCTCA ACCTTGCCGT GGAAGCGGCC
ATGGGCTACG ACCAGCTGGT GGCGCTGGCA CCGCGCCTGC GCGAGGCGGC CAGTCCTGCC
AGCTACCTGC CGCTGCACGA GGCGCTGTTC GGTAAGGCAC CTTGA
|
|---|
| Protein sequence | MHFVKTSAGQ QAFKERHADL SPRLRSAFLL FDGQRSLAQV LQAVAGMGVT QDEILALVER
EWLAPRDAAE PRLGVVAVAV PSVPAAPAAA ASSTDSAGDA PAQSEPSLAV RYRNAYPLAV
AITANLGLKG FRLNLAVEAA MGYDQLVALA PRLREAASPA SYLPLHEALF GKAP
|
|---|
| |