| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4996 |
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| Symbol | |
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| ID | 5750607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5531093 |
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| End bp | 5531779 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641300120 |
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| Product | fimbrial protein |
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| Protein accession | YP_001566010 |
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| Protein GI | 160900428 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.230772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTTT CGACTGTAAA TGGTGCTGCG CCTGTAAGTA CTTCGGAGCA TTCCAATCAC
CCCGGATCTT TTGCATATCA ATATGCCATT GTCACAGTTG AGTTGATCAA GACCGCAGAT
GGCGATATCA CTGCAGGTGG CGTGCTGGAC AGCGATTTCC TGTACGAACG CGCGACTGAT
GCATTTGGCC AGCTTCTCGC TCAATACAGC TTTTCCTCGC CCGTCGTCCT CCGGCCCAAG
GTGCCCACCT GTACCCCACA GGCGCCGGAG CCCGTGCGCA TGGCCCAGAC TGTCACTCAA
AAACTCACCT CAATCGGCTC AACCGGTGCT CCCCGCTCCT TCCTCATCTC GTTGTTGTGC
AAGGGCGGCA TCCCAGGTTC GTTGACCAAC GCCTATGTCA CCCTGACGGA TGTGGCAAAT
CCTGGAAATA TCGGCAATGC TCTGACCCTG TCGAAAACCT CGGTGGCAAA AGGTGTGGGT
GTGCAGATCC GCAAGGATGA CCAGATACTG GGCTTTGGCC CGGACTCCAA TGCCGCCGGC
AACAGGAATC AATGGTTTGC AGGGTCTGTT GCCTACGGGC AGGAGCGGTT GGATATCCCG
CTGACGGCGC GCTATGTCAA GACCGGAGAG AACGTGACCA TAGGCAGTGC CAATGCGGCG
GCGACCTTCA CCATCAGCTA CCAGTAG
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| Protein sequence | MRVSTVNGAA PVSTSEHSNH PGSFAYQYAI VTVELIKTAD GDITAGGVLD SDFLYERATD
AFGQLLAQYS FSSPVVLRPK VPTCTPQAPE PVRMAQTVTQ KLTSIGSTGA PRSFLISLLC
KGGIPGSLTN AYVTLTDVAN PGNIGNALTL SKTSVAKGVG VQIRKDDQIL GFGPDSNAAG
NRNQWFAGSV AYGQERLDIP LTARYVKTGE NVTIGSANAA ATFTISYQ
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