Gene Daci_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4987 
Symbol 
ID5750598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5519381 
End bp5519854 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID641300111 
Producttail collar domain-containing protein 
Protein accessionYP_001566001 
Protein GI160900419 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCG GCAACTTCGC GCCGGCAGGC TGGATGTTCT GCGAAGGGCA GCAAATGCCC 
ATCTCGGAAT ACGAAACCCT TTTCAATCTG ATCGGCACGA CATACGGCGG TGATGGCCAA
AGCACGTTCG CCCTGCCAGA CATGCGTGGC CGCATCCCCC TGCACGCGGG CAACGAATTC
ACGCTGGCCC AGGCCGCTGG AGTCGAAGAG GTCACGCTGA CCGTCAATCA GATTCCAGCC
CACACGCACG GCGTTCCCGC TTCCTCCGGC ACCGGCTTTC TGGCCTCGCC CGCCGACGCA
GTGTTTGCCA AGCACAGGGA TCACAAGGCC TTTGTGAAAG GCGTCCCCGC CACGTACATG
GCTACATCGA TGGTGAGTTG GGTAGGAGGG TCGCAGCCGC ATACCAATAT GCCGCCCTTC
CTTTGCGTGA ACTTCATCAT CTCGCTGTTC GGCATCTATC CCTCCCCCAC CTGA
 
Protein sequence
MFAGNFAPAG WMFCEGQQMP ISEYETLFNL IGTTYGGDGQ STFALPDMRG RIPLHAGNEF 
TLAQAAGVEE VTLTVNQIPA HTHGVPASSG TGFLASPADA VFAKHRDHKA FVKGVPATYM
ATSMVSWVGG SQPHTNMPPF LCVNFIISLF GIYPSPT