Gene Daci_4943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4943 
Symbol 
ID5750550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5465315 
End bp5466169 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID641300063 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_001565957 
Protein GI160900375 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.397095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC AGCGAGTCAT CACCGCCCTG ATCCTGCTGG CCATCTTGCT GCCTGCGCTG 
TTCTATCCGA CGGGCGTTCC GTTCGCCGTG GTGGTGCTCG TGCTCATGGC GGCGGGTGCC
TGGGAATGGG GTCGTCTCAA CGGCTTTGGC TCCGCTGGTG CCATCTGCAT AGGTGCCATC
TGCACGGCGA TGTGCGTGGG AGCCTGGGCC GCGGGCTGGC TGGAGCGTCC TCTGACCGCG
GTCTGGGTGG TCGCTGGCTC TGCCTGGGTG CTGGGCGGCG GGGCACTGCT GCGCGCAGGC
GTGGCCGGCT GGCCGCGCAT TGCGGGGCCT GTGCGACTGG TCGGCGGAGT GCTGGCCCTG
TGGCTGGCCT GGGTGGCCGT GGTGCAGGCA CGCATGATGG GCATCAACTT CCTGCTGTCG
GTGCTGGTGC TGGTCTGGGT GGCCGATGTC TTTGCATATT TCGCAGGCCG GACCCTGGGC
CTGAAATTCA CCAAGTCCAA GCTCGCGCCG TCCATCAGTC CTGGCAAGAG CTGGGAAGGC
GTGTGGGGCG GCATGGCCGG CGTGCTGGTG CTGGCCTTGG CCTGGGTCTG GGCGGACCGC
CACTACGCGG TGGCCGTGCC CAGTTTCTAT TCGTTGCTGT TGGCGCGCGG GGCCTGGTTC
CTGCTGCTGG CGGTTGTGTT CATGGCCGCG ATGAGCGTGG TCGGCGACCT GGTCGAATCC
CTGGTCAAGC GCAGCGTGGG CGTCAAGGAC AGCAGTGGTC TGCTGCCCGG CCATGGCGGC
GTGCTTGATC GCGTCGATGC CCTGCTGCCG ACCCTGCCGC TGGCCATGAT GCTTTCCTCT
TTCGCGCATT CATGA
 
Protein sequence
MLKQRVITAL ILLAILLPAL FYPTGVPFAV VVLVLMAAGA WEWGRLNGFG SAGAICIGAI 
CTAMCVGAWA AGWLERPLTA VWVVAGSAWV LGGGALLRAG VAGWPRIAGP VRLVGGVLAL
WLAWVAVVQA RMMGINFLLS VLVLVWVADV FAYFAGRTLG LKFTKSKLAP SISPGKSWEG
VWGGMAGVLV LALAWVWADR HYAVAVPSFY SLLLARGAWF LLLAVVFMAA MSVVGDLVES
LVKRSVGVKD SSGLLPGHGG VLDRVDALLP TLPLAMMLSS FAHS