| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4925 |
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| Symbol | |
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| ID | 5750532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5444882 |
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| End bp | 5446804 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641300045 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001565939 |
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| Protein GI | 160900357 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.147921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.185615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAATC AGTGGTTTTC AAAAATTGCC GTCTGGCTGG TCATCGCCAT GGTGCTGTTT
ACGGTGTTCA AACAATTTGA CACCCGCGGC GGCGCCGGCG CGTCCCATGT CGGTTACTCC
GAGTTCCTGG AAGAGGTGCG AAGCAACCGC ATCAAGAGCG CCACCATCCA GGAAAGCCCC
GGCGGCACCG AGATCGTGGC CACGACCAAC GATGACCGCA AGGTGCGCAC CACGGCCACC
TACCTGGATC GCGGGCTCGT GGGCGATCTG ATCAACAACA ACGTCAAGTT CGACGTCAAG
CCCCGCGAAG AAGGCTCGGT CCTGATGACC CTGCTCGTCA GCTGGGGCCC CATGCTGCTG
TTGATCGGCG TGTGGGTGTA CTTCATGCGC CAGATGCAGG GCGGCGGCAA GGGCGGTGCT
TTCAGCTTCG GCAAGAGCAA GGCGCGCATG CTGGACGAGA ACAACAACAC CGTGACCTTT
GCCGACGTTG CAGGCTGCGA CGAAGCCAAG GAAGAGGTCA AGGAAGTCGT GGACTTCCTA
AAGGACCCCA ACAAGTTCCA GAAGCTCGGC GGCCGCATTC CGCGTGGTCT GCTGCTGGTC
GGGCCTCCGG GTACCGGCAA GACGCTGCTG GCCAAGTCCA TTGCGGGCGA GGCCAAGGTC
CCGTTCTTCA GCATCTCGGG TTCCGACTTC GTGGAAATGT TCGTGGGCGT GGGCGCTGCC
CGTGTGCGCG ACATGTTCGA GAACGCCAAG AAGAACGCAC CCTGCATCAT CTTCATCGAT
GAAATCGACG CCGTGGGCCG CCAGCGCGGC GCAGGCCTGG GCGGTGGCAA CGATGAGCGT
GAACAGACCC TGAACCAGAT GCTGGTCGAG ATGGACGGCT TCGAGACCAA CCTCGGCGTT
ATCGTCGTGG CTGCAACCAA CCGTCCCGAC ATCCTGGATG CGGCGCTGCT GCGCCCCGGC
CGTTTCGACC GCCAGGTGTA TGTGACGCTG CCCGACATCC GCGGCCGCGA GCAGATCCTC
AATGTGCATA TGCGCAAGAT TCCTGTCGGC CAGGACGTGA ATCCGGGCGT GATCGCCCGC
GGCACGCCCG GCATGTCGGG CGCCGATCTG GCCAACCTTT GCAACGAAGC AGCCCTGATG
GCCGCGCGCC GCAATGCGCG TACCGTGGAG ATGCAGGATT TCGAGAAGGC CAAGGACAAG
ATCATCATGG GCCCCGAGCG CAAGAGCATG GTCATGCCCG AGGAAGAGCG CCGCAACACG
GCCTACCACG AGGCGGGCCA TGCGCTGATC GGCAAGCTCC TGCCCAAGTG CGATCCCGTG
CACAAGGTCA CCATCATCCC GCGCGGCCGT GCGCTGGGCG TGACCATGAG CCTGCCCGAA
AAGGACCGCT ACTCCTATGA CAAGGAGTTC ATGCTCAACC AGATCGCCAT GCTGTTCGGT
GGGCGCATTG CCGAAGAAGT GTTCATGAAC CAGATGACCA CGGGCGCGAG CAACGACTTC
GAGCGGGCCA CGCAGATCGC ACGCGACATG GTCACGCGCT ACGGCATGAC CGACGCGCTG
GGTCCCATGG TCTATGCGGA GCAGGAAGGC GAGCCTTTCC TGGGCCGCTC GATGAGCAAG
ACCAACAGCA TGAGCGAGCA GACGATGCAG AAGGTGGACC AGGAGGTTCG CCGCATCATC
GACGAGCAGT ACGGACTGGC GCGCAAGCTG ATCGAGGACA ACTCCGACAA GATGCACGCC
ATGGCCAAGG CCATGCTCGA CTGGGAAACC ATCGACGCCG AGCAACTCGA TGACATCATG
GCCGGCCGCG AGCCGCGTCC TCCCAAGGAC TGGGTGCCGC GCAACCCGCC GTCGTCCGGC
GGTGGCAACT CGTCCGGCGG CACGCCGGCA GTGGATGCCG ACCCTGCGCC CACCACGGCC
TGA
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| Protein sequence | MNNQWFSKIA VWLVIAMVLF TVFKQFDTRG GAGASHVGYS EFLEEVRSNR IKSATIQESP
GGTEIVATTN DDRKVRTTAT YLDRGLVGDL INNNVKFDVK PREEGSVLMT LLVSWGPMLL
LIGVWVYFMR QMQGGGKGGA FSFGKSKARM LDENNNTVTF ADVAGCDEAK EEVKEVVDFL
KDPNKFQKLG GRIPRGLLLV GPPGTGKTLL AKSIAGEAKV PFFSISGSDF VEMFVGVGAA
RVRDMFENAK KNAPCIIFID EIDAVGRQRG AGLGGGNDER EQTLNQMLVE MDGFETNLGV
IVVAATNRPD ILDAALLRPG RFDRQVYVTL PDIRGREQIL NVHMRKIPVG QDVNPGVIAR
GTPGMSGADL ANLCNEAALM AARRNARTVE MQDFEKAKDK IIMGPERKSM VMPEEERRNT
AYHEAGHALI GKLLPKCDPV HKVTIIPRGR ALGVTMSLPE KDRYSYDKEF MLNQIAMLFG
GRIAEEVFMN QMTTGASNDF ERATQIARDM VTRYGMTDAL GPMVYAEQEG EPFLGRSMSK
TNSMSEQTMQ KVDQEVRRII DEQYGLARKL IEDNSDKMHA MAKAMLDWET IDAEQLDDIM
AGREPRPPKD WVPRNPPSSG GGNSSGGTPA VDADPAPTTA
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