Gene Daci_4804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4804 
Symbol 
ID5750407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5300618 
End bp5301595 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID641299920 
Productalpha/beta hydrolase fold 
Protein accessionYP_001565818 
Protein GI160900236 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAG CCCCCTCCTC CCTCTCTGCC CCGGCCGCTG AAGAAGCGCC CATCTACGTT 
GCCCGCCGCC CCTGGCGCTC GCGCATGGTG CCGGTGCGCA CCATGGAGTA CCACGTGCGC
GAGTGGGGGC CCGTGGATGG CGATCCCGCC CTGGCGCCGC TGGTGCTGGT GCACGGCTGG
ATGGATGTGG CGGCCTCCTA CCAGTTCGTG GTCGATGCCT TTGGCGAGGC CTTCATGGCG
GGGCGCCGCA TCATTGCGCC GGACTGGCGC GGCTTCGGCC TGAGCCGGCC GGCCTGGCCT
GCCGACCGGC ATGACTTTGC CGACTACCTG GGCGACCTGG ACCACCTGCT GGACATCCTG
GTGGGCGATA CGCCCGTGGA CCTGGTGGGC CACAGCATGG GCGGCAACGT GTCCATGATG
TATGCGGGCG CGCGGCCTGC GCGCATACGC CGGCTGGTCA ATCTGGAGGG CTTCGGCATG
CCGGCCACCC GGCCCGACCA GGCGCCCGCA CGCTATGCGC AGTGGATGGA CGAGCTGCGC
CAGCTGCGCA GCGGCGGCAT GGAGCTCAAG AGCTACGACA GCGTGCAGGA CGTGGCGCGC
AGGCTGATGA AGACCAACCG CCGCCTGCCC GGGGACAAGG CGCTGTGGCT GGCCCACCAC
TGGGCGGCGC CCAATGCGCA GGGCCGCTGG GAAATCCTGG GCGACACGGC GCACAAGCTC
ATCAGCGCGC AGCTGTTCCG CGTGGAAGAA ATCCTGGCCC TGTACCGTGC CATCACGGCG
CCGGTACTGG CCGTCGAGGC CAGCGACGAC AGCCTGGGCA TGTGGTGGAA GGACCGCTAC
ACGCTGGCCG AGTACCACGA GCGCATCGGG CAGATTGCCG TCTGCCGCAC GGCCGTGGTC
CAGGACGCCG GCCACATGCT GCACCACGAC CAGCCGGCGG ACGTGGCCGG GCTGATCGAG
CAATTCCTCA GCACCTGA
 
Protein sequence
MLQAPSSLSA PAAEEAPIYV ARRPWRSRMV PVRTMEYHVR EWGPVDGDPA LAPLVLVHGW 
MDVAASYQFV VDAFGEAFMA GRRIIAPDWR GFGLSRPAWP ADRHDFADYL GDLDHLLDIL
VGDTPVDLVG HSMGGNVSMM YAGARPARIR RLVNLEGFGM PATRPDQAPA RYAQWMDELR
QLRSGGMELK SYDSVQDVAR RLMKTNRRLP GDKALWLAHH WAAPNAQGRW EILGDTAHKL
ISAQLFRVEE ILALYRAITA PVLAVEASDD SLGMWWKDRY TLAEYHERIG QIAVCRTAVV
QDAGHMLHHD QPADVAGLIE QFLST