| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4785 |
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| Symbol | |
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| ID | 5750388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5281070 |
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| End bp | 5282653 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641299901 |
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| Product | spermidine synthase |
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| Protein accession | YP_001565799 |
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| Protein GI | 160900217 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.542005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACGCGG GAAGGGGCGC ATCGCGCACA ATACCGGCCG TGCAAACCTC AGCCCCTCTT
GCCGGCGCGC AGCCGGCGCG TCCCATCGAC ATCGCCCTGC TGGTCAGCGT CTTCGTGATC
GCGGCCTGCG GCCTGCTTTA CGAACTGGCT GCGGGTGCGC TGGCTTCCTA TCTGCTGGGC
GATTCGGTCC TGCAGTTCTC CACCATCATC GGCAGCTACC TGTTCGCCAT GGGCATAGGC
TCCTGGCTGT CGCGCTATTT CGAGGACCAT CTGCCCGCGC ACTTTCTGCG CATCGAGCTG
ATGGTGGCCC TGGTCGGCGG CGCGCTGCCG GCCACGCTGT TCATTGCCAA TGCCTACGCG
CCCGGCGCCT TCCGGTTCCT GCTGTACGGC ATGGTGCTGG TGGTGGGCAC CCTGGTGGGG
CTGGAGATTC CGCTGGTGAT GCGCATCCTC AAGCGCAATG TGACGCTCAA GGACCTGGTG
TCCCAGGTGC TGACCTTCGA CTACCTGGGC GCGCTGGCCG TGTCGCTGGC ATTTCCGCTG
CTGCTGGTGC CCAAGCTGGG CCTGGTGCGC ACGGGGCTGC TGTTCGGCTT CATGAATGCG
GCGGTGGCGG TCTGGGCACT GCTGCTGTTT CGGCATGAGC TGCGGCGCCC GCGCGCCCAT
GCCCTGGCCT GCGCGGCCGT GCTGGCCCTG CTGGGCACGG GCATCTGGGG CGCCGACCAT
CTGACGCGCC TGGCCGACGA CCATTTCTAC CAGGACCGCA TCGTGCTCTC CAGCAGCTCG
CCCTACCAGC GCATCGTGGT GACGCAGGGG CGCCAGGGCG CGCGGCTGTA CCTCAACGGC
AACCTGCAGT TCGCCCAAAG CGACGAGTAC CGCTACCACG AGGCCCTGGT CCACCCCGTG
ATGGCCGCGC ATGGCGCGCC CAAGCGCGTG GCCGTGCTGG GCGGCGGCGA CGGCATGGCC
GTGCGCGAGG TGCTCAAGTA CCCCTCGGTG GAGTCGGTCA CCCTGGTGGA GCTGGACCCG
GCCATGACGG ACCTGTTCAA GGACAACGCC ATGCTGCGCC GGCTCAACGG CGAAGCGCTC
AGCGATGCGC GCGTGCACAT CCTCAATACC GATGCCTTCC ACTGGCTGCA GCAGGGCGGC
GATACCTTCG ACGTGGTCAT CGTCGATTTC CCCGACCCGA CCAATTTCGC CATCGGCAAG
CTGTTCACCA ACAGCTTCTA TGCCTTGCTG GACAAGCGCC TGGCCGCCAG CGGCTACGCC
GTGGTGCAGA CCACCTCGCC CCTGATCGCA CGCAAGAGCT ACTGGACCGT GGTGCAGACC
ATCGAATCCA TCGGCCTGCA GGCCACGCCC TACCACGCGC ATGTGCCCAG CTTTGGCGAA
TGGGGCTTCG TCATCGCCAG CCACCGGCCT TGGCGCGAGC CCGATGCCCT GCCTGCGGGC
CTGCGCTTTC TGAGCGCGCA GACCATGGCG CTGATGTTCG ACTTCCCGCT GGACATGGCG
CGCGTTCCGG CCGAGGTCAA CCGCCTGTCC AACCAGGTGC TGGTCAACAC CTACGAGCGC
GAATGGGGCA GGGTGGAGCG TTGA
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| Protein sequence | MHAGRGASRT IPAVQTSAPL AGAQPARPID IALLVSVFVI AACGLLYELA AGALASYLLG
DSVLQFSTII GSYLFAMGIG SWLSRYFEDH LPAHFLRIEL MVALVGGALP ATLFIANAYA
PGAFRFLLYG MVLVVGTLVG LEIPLVMRIL KRNVTLKDLV SQVLTFDYLG ALAVSLAFPL
LLVPKLGLVR TGLLFGFMNA AVAVWALLLF RHELRRPRAH ALACAAVLAL LGTGIWGADH
LTRLADDHFY QDRIVLSSSS PYQRIVVTQG RQGARLYLNG NLQFAQSDEY RYHEALVHPV
MAAHGAPKRV AVLGGGDGMA VREVLKYPSV ESVTLVELDP AMTDLFKDNA MLRRLNGEAL
SDARVHILNT DAFHWLQQGG DTFDVVIVDF PDPTNFAIGK LFTNSFYALL DKRLAASGYA
VVQTTSPLIA RKSYWTVVQT IESIGLQATP YHAHVPSFGE WGFVIASHRP WREPDALPAG
LRFLSAQTMA LMFDFPLDMA RVPAEVNRLS NQVLVNTYER EWGRVER
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