Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4770 |
Symbol | |
ID | 5750373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5267104 |
End bp | 5267595 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641299886 |
Product | colicin V production protein |
Protein accession | YP_001565784 |
Protein GI | 160900202 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.161022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACGG TGGACTGGGT TTTGCTGGCC TGCGTGCTGG CCTCGATGCT GCTTGGCGCC TGGCGCGGGC TGGTGTACGA GGTGCTGTCT CTGCTGGGCT GGCTGGTGGC CTTTGTCGTG GCCCGCATCT GGGCGGCCGA CGTGGCGCTG TGGCTGCCCA TGCAGGACTG GGACATGCAG CTGCGCTACG CCGCAGGCTT TGTGCTGTTG TTCGTGCTGG CGCTGTTCGG CTGGGGCCTG GTGTCCTGGC TGTCGCGCCG GCTGATCGAG GCGGTGGGCC TGAGGCCCGT GGACCGCACG CTGGGCGCGC TGTTCGGCGT GCTGCGCGGG GCGCTGCTGG CCCTGGTGGC AACGATGGTG ATCAGCTACA CGCCGCTGCA CCAGGGGCAG TGGTGGCAGG ATTCAGCCCT GGCGCCATGG CTGATGCAGG CGCTGGCTGT GGTTTTGCCA CAGCTGCCGC AGGAATGGGG ACGCTATCTG CCGGCTGCAT GA
|
Protein sequence | MSTVDWVLLA CVLASMLLGA WRGLVYEVLS LLGWLVAFVV ARIWAADVAL WLPMQDWDMQ LRYAAGFVLL FVLALFGWGL VSWLSRRLIE AVGLRPVDRT LGALFGVLRG ALLALVATMV ISYTPLHQGQ WWQDSALAPW LMQALAVVLP QLPQEWGRYL PAA
|
| |