Gene Daci_4770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4770 
Symbol 
ID5750373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5267104 
End bp5267595 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID641299886 
Productcolicin V production protein 
Protein accessionYP_001565784 
Protein GI160900202 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.161022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGG TGGACTGGGT TTTGCTGGCC TGCGTGCTGG CCTCGATGCT GCTTGGCGCC 
TGGCGCGGGC TGGTGTACGA GGTGCTGTCT CTGCTGGGCT GGCTGGTGGC CTTTGTCGTG
GCCCGCATCT GGGCGGCCGA CGTGGCGCTG TGGCTGCCCA TGCAGGACTG GGACATGCAG
CTGCGCTACG CCGCAGGCTT TGTGCTGTTG TTCGTGCTGG CGCTGTTCGG CTGGGGCCTG
GTGTCCTGGC TGTCGCGCCG GCTGATCGAG GCGGTGGGCC TGAGGCCCGT GGACCGCACG
CTGGGCGCGC TGTTCGGCGT GCTGCGCGGG GCGCTGCTGG CCCTGGTGGC AACGATGGTG
ATCAGCTACA CGCCGCTGCA CCAGGGGCAG TGGTGGCAGG ATTCAGCCCT GGCGCCATGG
CTGATGCAGG CGCTGGCTGT GGTTTTGCCA CAGCTGCCGC AGGAATGGGG ACGCTATCTG
CCGGCTGCAT GA
 
Protein sequence
MSTVDWVLLA CVLASMLLGA WRGLVYEVLS LLGWLVAFVV ARIWAADVAL WLPMQDWDMQ 
LRYAAGFVLL FVLALFGWGL VSWLSRRLIE AVGLRPVDRT LGALFGVLRG ALLALVATMV
ISYTPLHQGQ WWQDSALAPW LMQALAVVLP QLPQEWGRYL PAA