Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4761 |
Symbol | |
ID | 5750353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5252942 |
End bp | 5253466 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641299866 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001565775 |
Protein GI | 160900193 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCTTGA ATCACACACA TTCTTCGCTG GAAGAGGTCT TCATTGCTTC GCGTGGACAG TTGGTGAGGG TCGCGCGAAG AATTCTCAGG AATCCCGAAC TGGCCGACGA CGCCGTGCAG GACACCTATC TGCGCGTTGC CGAGATGCGC AGCGATGCCG AGATCGCCAA GCCCGCCGCC TACTGGACGC GCGCCGTCTG CAACATGGCG CTGGACTACC TGCGCCGCCA GGAGCGCGAG AACAGCTACC GCACCCACGG CGTGGATGTG GAGACGCTGG AGATACCGGA CAGCCGCTCG CCCGAGCGCC TTTTGTTCGA GTCCCAGGCC ATACGCCTGA TCGACCAGGC CCTGGACGAG GTGCCGCCCA AGACCCGCGA GACCTTCGAG CTGTACCGCA TCAAGGGCCT CACCCAGCGC CAGATCGCCG AGCACATGGA GTGCGCGCTG GGCCTGGTGA ACGCCAGGAT TGCCGACGCC TGCAGGGCCA TCCATGTCCA CCGCTCGCTG CTGGACCACC ATTGA
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Protein sequence | MSLNHTHSSL EEVFIASRGQ LVRVARRILR NPELADDAVQ DTYLRVAEMR SDAEIAKPAA YWTRAVCNMA LDYLRRQERE NSYRTHGVDV ETLEIPDSRS PERLLFESQA IRLIDQALDE VPPKTRETFE LYRIKGLTQR QIAEHMECAL GLVNARIADA CRAIHVHRSL LDHH
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