Gene Daci_4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4646 
Symbol 
ID5750236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5104177 
End bp5105052 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content74% 
IMG OID641299749 
Producthypothetical protein 
Protein accessionYP_001565660 
Protein GI160900078 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000211622 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACCGC TCTACCCCGA TCGCCGCCGC CTGCTGGGCG CCCTGCCCGC GCTGGCCGCC 
CTGAGCGGCT GCGCCAGCCT GCCGGCAGAA GCTGTCAGCG TCGACGTGGC CGTGGTCGGC
GGCCTGTCGC TGTGCGGTGT GTGGCCGCGC CTGGCCGACG CGGCGGGCCG CAGCCTGGGC
CTGTCCGTGC GCACCGCCGT TGCCGCGCCC AAGGAGGGCG TGATCCCCGC CATGGCCCAG
GGCCGCGCCC AGCTGCTGCT GATCCACGCC AGCGACGAAG CCATGTCGCT GGAGGCTGCC
GGCCTGGCAT CGGCCGCGCG GGTCTGGGGC TGGAACGAGC ATGTGTTCGC CGGCCCTTCG
CACGACCCGG CCCGCGTGCG CGGCGCGGCC GATGGCGTGG AGGCCATGCG CCGCATCGTT
GCCAGCGGCT CGCCCTTCAT CGCGCTGCGC GACCCCGGCA GCTATACCGT GGTCCAGCGC
CTGTGGCGCC GCGCCGGCAT ACGGCCGGAC GCCCGCTGGC TGCGCGCCGA TACCGGGCCG
CGCCCCCAGG CCGTGCTGCA GTTGGCGGCC GAGCTCCAGG CCTATGCCGT GGTCGGCCAT
ATCCCGCTGC ATTTCGGCAA GATGGGCGCG CCCGGCATCG AGCTGCTGCT GCACGGCGAC
CCGCTGATGC GCCGGCCCTA TGTGCTGCTC ACGCCCGGGC CGCGCCATCC GGCCGACGCT
GGCCAGCGCC GCAGCGCGCA ACGCCTGGCC GAGCATCTGC TGTCCGCACC GGGCCAGCAT
GAACTGGCGC TGGCCAATGC CGCTGCCGGA GGTCCCTGGA TCTTCGAACG CGACAGCATG
CCCCTGGTCA ACGACACCGG CGGCGGCCAG GAGTAA
 
Protein sequence
MEPLYPDRRR LLGALPALAA LSGCASLPAE AVSVDVAVVG GLSLCGVWPR LADAAGRSLG 
LSVRTAVAAP KEGVIPAMAQ GRAQLLLIHA SDEAMSLEAA GLASAARVWG WNEHVFAGPS
HDPARVRGAA DGVEAMRRIV ASGSPFIALR DPGSYTVVQR LWRRAGIRPD ARWLRADTGP
RPQAVLQLAA ELQAYAVVGH IPLHFGKMGA PGIELLLHGD PLMRRPYVLL TPGPRHPADA
GQRRSAQRLA EHLLSAPGQH ELALANAAAG GPWIFERDSM PLVNDTGGGQ E