Gene Daci_4624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4624 
Symbol 
ID5750214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5084427 
End bp5084840 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID641299727 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001565638 
Protein GI160900056 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000994253 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATTCG GAACAATGGA CGATGACGGC GAAGAGGTGA TGAACGAGAT CAACATGACG 
CCGCTGGTCG ACGTCATGCT GGTGCTCCTG ATCATCTTCA TCATCACCGT GCCGGTGATG
AAGCATTCGG TGAACGTGGA CCTGCCCCGC GCCACCAACC AGCCCGAGGA CGTCAAGCCC
GCCACGGTGC GCCTGACCGT CTCCGCCGAT GGCCAGTACC ACTGGAATGG CGTTGCCGTC
AGCGATACGC AGTTCGAGGA GAACCTCAAG GCCGAGGCGG CCAAGGAGCC GCAACCTGAC
CTGCATATCC AGGGCGACAA GGAAGTCCGC TACGAGCGCG TGGCCCAGGC CATGGCTGCC
GCACAGCGTG CAGGCGTGCG CAAGATCGGC TTCGTGACGG ACCCGGCCAA GTAG
 
Protein sequence
MAFGTMDDDG EEVMNEINMT PLVDVMLVLL IIFIITVPVM KHSVNVDLPR ATNQPEDVKP 
ATVRLTVSAD GQYHWNGVAV SDTQFEENLK AEAAKEPQPD LHIQGDKEVR YERVAQAMAA
AQRAGVRKIG FVTDPAK