| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4608 |
|---|
| Symbol | |
|---|
| ID | 5750197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5068500 |
|---|
| End bp | 5069498 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641299710 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001565622 |
|---|
| Protein GI | 160900040 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.960011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.108983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATACA CGATTTCAGG CCGACCATGG CCGCAAGTAT CTCTACACTC TTCCTCTGGA
ACAAACGAAA ATTGCTGCCG CAAACACTGC ATAAAACTCA TGAATTACCG ACGTCTGACG
CCCTCCATGT CCCTGCTGCT GGTCTTCGAG GCGGCCGCGC GCCACGAAAG CTATGCGCGT
GCGGCCGAGG AGCTGTCGCT CAGCCAGAGC GCCATCAGCC GGCAGGTGCA GACACTGGAG
GCGCAGCTGG GCATCAGCCT GTTCCGCCGC GAGGGCCGCA CGGTGCGCCT GACCGACGTG
GGGCGCCGCT ACTTCATCGA CCTGGGCGCC GCGCTGGGCC GCATACGCAG CGCCACCCTG
CAGGCCATGT CACGCCAGTC CGGCGGTGGC ACGCTCAATC TGGCCACCCT GCCCACCTTC
GGCTCCAAAT GGCTGCTGCC GCATCTGCAT GGCTTCTACC AGGCGCAGCC CGGGGTGACG
ATGCACATCC ACTCGCGCAT CGGCGATATC GATTTCGACA GCGCAGAGAT AGACGCCGCC
ATCACCGTCG GCACGGGAGA CCGGCCCGGG CTGACCGCGC ATCGCCTGTA TCACGAGTTT
CTGGTGGCGG TGGCCAGCCC GCAGGCGCTG CAGCAGGCCG GGCAGGCAGC AGCCTCGCCG
GACTGGGCGG GCCAACAGGT GCTGCTCACG GTGGCCAGCA ACCGGCAGGC CTGGAGCGAG
TGGTTCACGC ACTATCGGCT CGATCACCGG CAGATGCGGA TAGGGCCGAG CTTCGAGCTG
ACCTCGCACC TGATACAGGC CGTGCTGGCA GGCATGGGCG TGGGCCTGGT GCCACGGGTG
CTGGTGGAAG AGGAGATGGC GCGCGGTGAG CTGCACGTGG TGGGAGACGC CATCCCCAGC
CAGCGCAGCT ACTACCTGGT CTATCCCGAG AGGAACGCGA CACTGCCGGC GCTGGCAGCC
TTCCGGCAAT GGCTGCTTGC AACCTGCGCC CAGGGTTGA
|
|---|
| Protein sequence | MQYTISGRPW PQVSLHSSSG TNENCCRKHC IKLMNYRRLT PSMSLLLVFE AAARHESYAR
AAEELSLSQS AISRQVQTLE AQLGISLFRR EGRTVRLTDV GRRYFIDLGA ALGRIRSATL
QAMSRQSGGG TLNLATLPTF GSKWLLPHLH GFYQAQPGVT MHIHSRIGDI DFDSAEIDAA
ITVGTGDRPG LTAHRLYHEF LVAVASPQAL QQAGQAAASP DWAGQQVLLT VASNRQAWSE
WFTHYRLDHR QMRIGPSFEL TSHLIQAVLA GMGVGLVPRV LVEEEMARGE LHVVGDAIPS
QRSYYLVYPE RNATLPALAA FRQWLLATCA QG
|
|---|
| |