Gene Daci_4497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4497 
Symbol 
ID5750085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4922376 
End bp4923485 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content59% 
IMG OID641299598 
Producthypothetical protein 
Protein accessionYP_001565511 
Protein GI160899929 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.209765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGG AGTGCTTTGT TACGGGAGGG ACGGGCTTCA TCGGCCAGCA TTTGCTGTCG 
TACCTGAGCG CGAAAGGTCA CACCATTCGG GTGCTGATGC GTCGCCCGGA GCGCCTCGCT
GAACTGCGCC AGCAGGTCGA TGGTTTGGGT GGCGTTGCAG CCCGCGTCTT TGCCGTGGCC
GGCGATCTGG AGCAAGAAGA CCTCGGTCTG AGCCTTGCGG ATAGAGAGGT CCTGCGGCAG
GCCAAGGTCG TATTCCATCT GGGAGCCCAC TTCGCCTGGG GCCTTTCGAT GGAGCATGCA
CGTGCAGTGA ATGTGGAAGG GGCAAGGCGC GTGGCGCAGT TGGCGGCCGA GCAAGAGAGC
CGGTTGGTGA TGATCGGTGG CTACATGCTG AAAAACAATG AACATCTGCA ACGCATCGGG
ATTGATCCCG GCCATCCGGA GCTGACGGAT TGGCCTGCCA TCTATCGCCA AGTCGGTGCT
TACGAGGCGA GCAAACTGGA GGCGCATTTC GCGACCCTCG GCTTCATGAA TGCCAAGGGT
GGAGAGATGA CCGTTGTACA CCCCGCCACG GTTTGCGGTC ATAGCCGCAC GGGGCATATC
GCGGACGGCC AGCCGCTGGT GGATCTGATA CGCAATCTGG TGCAGGGAAA GCTGGCGGCA
GTACCCGGTA CTGCCGCGCA CTGGTTGCCA CTGGTCACTG TGGATTATCT GGTCGAGTTG
GTGGCGGCTT GCGCCTTTGA TCCTTCCATG GTGGGCCAGG AACTGCTGGC CCTCGATGCC
CAGAGCCCTG GCTTGCAGGA ACTTCTCACG CAGGTGACAC AACCTCTTGG GCTGAAGGCG
CCCGGGCGTC ATATCCCGCT GCGATTGCTG AAATGGCTTT TGGGTATTCG TCCCATTGCG
AGGTTTTTGA ATACCAGCGC CGAGGCCCTG GATTTTATCC AGACAACCCG TTTTGACACG
ACGGAAGTGG AGCAATTTGC CCGAAGACAC GGAATCACAA AGCCGGATAT GCGCCAGTCG
TTGAGGAATA CTGCAATATA TGTCAGCTCA TATTGCATTA CAAAAGGCAA GGCCCGCCGA
CTTGCCCCTC CACTGCGCAG AACATCATAA
 
Protein sequence
MSVECFVTGG TGFIGQHLLS YLSAKGHTIR VLMRRPERLA ELRQQVDGLG GVAARVFAVA 
GDLEQEDLGL SLADREVLRQ AKVVFHLGAH FAWGLSMEHA RAVNVEGARR VAQLAAEQES
RLVMIGGYML KNNEHLQRIG IDPGHPELTD WPAIYRQVGA YEASKLEAHF ATLGFMNAKG
GEMTVVHPAT VCGHSRTGHI ADGQPLVDLI RNLVQGKLAA VPGTAAHWLP LVTVDYLVEL
VAACAFDPSM VGQELLALDA QSPGLQELLT QVTQPLGLKA PGRHIPLRLL KWLLGIRPIA
RFLNTSAEAL DFIQTTRFDT TEVEQFARRH GITKPDMRQS LRNTAIYVSS YCITKGKARR
LAPPLRRTS