Gene Daci_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4460 
Symbol 
ID5750048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4880818 
End bp4882245 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content70% 
IMG OID641299562 
Producthypothetical protein 
Protein accessionYP_001565475 
Protein GI160899893 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.267137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0296755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCTGGACCAT TGCGCGCGAG GAATGGCGCC TGCTGCTGCG CGACCGCGTG 
GCCGTGCTGG GGATGGCGCT GTGGCTGCTG CTCAGCGCCG CTGCCGCCTT CACCGCCTGG
GACCAGCGCA GCGCGGCCCA GGCCCAGCGC GAGCGCCACC AGTCCCAGGT GGACAGCGAG
TTCGAAGCCC AGCCCGACCG CCATCCGCAC CGCATGGTGC ATTACGGCCA TTTCGTGTTC
CGCCCGCTCA ATCCGCTGGC GGCCTTTGAT GCGGGCATCG ACGCCTACAC CGGCCACACG
CTGTTTCTGG AGGGCCACCG CCAAAACAGC GCCAACTTCG GCGATGTGCG CCAGTCCTCG
CTGCTGCTGC GGTTCGGCCA GCTCACGCCG GCCTTTGTGC TGCAGGTGCT GGCGCCGCTG
CTGCTGATCT TCATGGGCCA TGCCTGCATT GCACGCGAGC GCGAGGCCGG CACCCTGCGC
GTGCTGCTGG CCCAGGGCGT GGGCACGCGG CAGTTCTTGG CCGGCAAGCT GCTGGCGCTG
GCGGGCGTGG CGGCCCTGGT GCTGCTGCCG GCCCTGCTGG CCCTGGCCTG GATGGCCGTG
GCCACGCCGG TGCCCATCAG CCTGGTGACC ACGCTGGCGG CAGGCCATGT GCTGTGGCTG
ATGCTCTGGG CGGTGGGCAT CGTCGCTGTC TCGGCCTTCA TGCGGCGCGG GCGCGATGCC
TTGCTGGCCC TGCTGGCGGC CTGGGCCGTC GCCGTGGTGC TGCTGCCCCG TCTGGTGCCT
GAGCTGGTGG GATCTGCCCT GGCGCTGCCC ACGCGCTTCG AGACCGACAT CGCCACCGCG
CGCGAGCTGG CGGCGCTGGG CGACAGCCAC AATCCCGACG ATCCCTATTT CGCCGCTTTC
CGCGCCAGGG TGCTGGCGCA GTACGGTGTC TCGCGCGTCG AGGACCTGCC CGTCAACTAC
AAGGGCCTGG TCGGCATGGA AGGCGAGCGG CTGACCAGCG AACTCTTCAG GCGCCATGCC
GAGGCCAGCT TCGATCTGCA GGCCGAACAA CTGCGCCGGG CTGACGCATT TGCCCTGATC
AGCCCCGTGA TCGCGCTGCG CCGCCTGTCC ATGGCCGTGG CCGGGACCGA CCTGCAAGGC
TACCGGCGCT TTCTGGAGCA GGCCGAGCAG CATCGCTACC GCATGGTGCA GGCCCTCAAC
CGCCTGCAGG TGGACAAGCT CAGCTATGCG GGCGACCGAT CGAGCCGCGA CAACCGCATC
GGCCACGAGC ACTGGCGCGG CGTCTCCGAT TTCCACCACG AGCCCGATCC ACCGCTGGTG
GCCCTGCGTC GCGCGGCGCC TGCCGCCTAT GTGCTGCTGG CATGGCTGGC TGTATTGACG
GTGGCCTTGC TGCTGGCCAC GCAACGGCTG GGGAGGGTGG CGCGATGA
 
Protein sequence
MSAAWTIARE EWRLLLRDRV AVLGMALWLL LSAAAAFTAW DQRSAAQAQR ERHQSQVDSE 
FEAQPDRHPH RMVHYGHFVF RPLNPLAAFD AGIDAYTGHT LFLEGHRQNS ANFGDVRQSS
LLLRFGQLTP AFVLQVLAPL LLIFMGHACI AREREAGTLR VLLAQGVGTR QFLAGKLLAL
AGVAALVLLP ALLALAWMAV ATPVPISLVT TLAAGHVLWL MLWAVGIVAV SAFMRRGRDA
LLALLAAWAV AVVLLPRLVP ELVGSALALP TRFETDIATA RELAALGDSH NPDDPYFAAF
RARVLAQYGV SRVEDLPVNY KGLVGMEGER LTSELFRRHA EASFDLQAEQ LRRADAFALI
SPVIALRRLS MAVAGTDLQG YRRFLEQAEQ HRYRMVQALN RLQVDKLSYA GDRSSRDNRI
GHEHWRGVSD FHHEPDPPLV ALRRAAPAAY VLLAWLAVLT VALLLATQRL GRVAR