| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4455 |
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| Symbol | |
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| ID | 5750043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4875870 |
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| End bp | 4876757 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641299557 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001565470 |
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| Protein GI | 160899888 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00246938 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAACCC GGCATCTGCG CTACTTTCTC GCGGTGGTGG ACCAGGGCAG CGTCAGCCGC
GCAGCCGACT GGCTGGGCAT TGCACAGCCG GCCCTGAGCC AGACCCTGGC CCGCATGGAA
AAAGACCTGG GCGTGCAGCT GTTCCAGCGC TCACGCCAGG GCGCCCTGCC CACCCCGGCC
GCCCTGGCCA TGCTGGACGA TGTGCGCACC AGCGTGGCCC GCATAGATGC CGCCGCCAGC
CGCGCGCGCG AGATCGCCAG GGGCAGTGCG GGCCAGTTGA CCGTGGGCCT GGTGTCCTCG
GCGCTGTTCG GCACCCTGCC CCGCGCCCTG CGCGCGTTGC GGCAGCAGGC GCCCGGCGTG
CGGGTCATCC TGCGCGAGAT GAGCAATGCC GAGCAGGCCG AGGCCCTGCA GACCGGCGCC
ATCGACATCG GCCTCATGCA CACGCCCGTG GCCGTGGGCG GGCGCATGCG CGAGCGCCAG
CTGCTGCGCG AGCGCCTGGT GGCCGCCGTG CCCGATGAAT TCCAGATCGG CGAGGACGGC
CAGGTCAGCC TGGCCCAGAT CGCCGAGGCC GGGCTGGTGA TGTACCCGCA GGCGCAATTG
CCCGTGCTGC ATGCCGGCAT CCTCGACGCG CTGCGCAAGG CCGGGCACGA GGCCCATGTG
GCGCAGGAAG CCAACCGCAC CCTCACCGTG CTGGCCTGCG TGGCCGGCGG CTGCGGCGTG
GCCCTTCTGC CCAGCTGGAT ACGCTCCATG GACTTTCGCG GCGTGCGCTT TTGCGAGGTG
CGTGACGGCC AGGCCCTGCC CAGCCTGGAC CTCAGCGCCA TCTGGCCCGC ACGCTCCACG
CCCACGCTGG CCGACCTGTT CGCGCACCTG GATCTGGGGG AAGACTGA
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| Protein sequence | METRHLRYFL AVVDQGSVSR AADWLGIAQP ALSQTLARME KDLGVQLFQR SRQGALPTPA
ALAMLDDVRT SVARIDAAAS RAREIARGSA GQLTVGLVSS ALFGTLPRAL RALRQQAPGV
RVILREMSNA EQAEALQTGA IDIGLMHTPV AVGGRMRERQ LLRERLVAAV PDEFQIGEDG
QVSLAQIAEA GLVMYPQAQL PVLHAGILDA LRKAGHEAHV AQEANRTLTV LACVAGGCGV
ALLPSWIRSM DFRGVRFCEV RDGQALPSLD LSAIWPARST PTLADLFAHL DLGED
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