| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4423 |
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| Symbol | |
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| ID | 5750011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4839368 |
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| End bp | 4845418 |
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| Gene Length | 6051 bp |
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| Protein Length | 2016 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299525 |
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| Product | hypothetical protein |
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| Protein accession | YP_001565438 |
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| Protein GI | 160899856 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAG ACCCCCGCCG AGATTCCCCC GCAGATGCCG CCCCCGCCGC CGCCCAGGCG
CCGCAGACGG CCCCGCAGCT GCGCATCGGC ACCGTCGCCA AGCTCAATCT CGCCGACTTC
CAGAACGCCG TGCCCGCGCT GCTGGAGCTG GCCATCGTCA ACGAGGGCGA GCTGCCGCTG
CAGGCGCTGA GCCTGCACCT GGCCTCGGAG CCTGCCTTCA TCAAGCCGCG CACCTGGCGC
CTGGAGTCGG TGGCCGCGCA CAGCACCTAT GCGCTGACCG ACCTGGATGT GGCGCTGGAC
GGCGCCTTGC TCTCGCGCCT GACCGAGGCC GAGCCTGCCG TGCTGCGGCT GGAGCTGCGC
AGCGGCCAGC CGGCAGAGAC GGTGCTGGCC CGGCACGAAC ACCCGCTGGA ACTGCTGGCA
CGCAACCAGT GGGGCGGCCT GGGGCATTTG CCCGAGATGG TGACGGCCTT CGTGCAACCC
AACGACCCGG CCGTGGACCG CATCCTTAAA GGCGCGGCGC AGGCGCTGGA GTCGGCGGGC
AAGTCCGGCG CCATCAACGG CTATGAACAG GGGCCGCAGC GGGCCTGGGA ACTGGCCTCG
GCCATCTGGA CTTCCGTGCT CCAGAAGAAA CTCAACTACG CGCTGCCGCC GGCCAGCTTC
GAGCATGCGG GCCAGAAGAT ACGCGGCGCG ACCCAGGTGC TGGATGCGGG CCTGGCCACC
TGCCTGGACC TGACGCTGCT GTTCGCCTCC TGCCTGGAGC AGGCGCACCT GAACCCGCTG
CTGGTCTTCA CGCGCGGCCA TGCCTTCGTG GGCCTGTGGC TGGGCAGGCA GGAATTCTCG
ACCGCCGTGG TCGATGACAT CACGGCCGTG CGCAAGCGGC TCAAGCTGCA GGAGCTGGTG
GTCTTCGAGA CCACGCTGGC CGCGCAAGGC CAGGCCGTGG CCTTCAGCCA GGCCATTGCC
CAGGGCGCGC GCCAGCTGGC CGAAGAGCAT GAGGACCAGT TCGAGCTGCT GGTGGACGTG
CGGCGCGCGC GCATGCAGCG CATCCGCCCG CTGGCGCTGG CCCAGCCGCA GGACACCGCG
CCCGAGGCCG GCGAAGGCCA GGCCGAGCCA CGGCTCACCG TGGAGCCGCC GCCCGAACTC
CTGGCGCAGG CGCAGGCACG CGAAGTGCCC ACCTCCCAGC TCGATCCCAA GGACAGGCTG
GCGCGCTGGC AGCGCCGGCT GCTGGACCTG TCGCTGCGCA ATGCCCTGCT CAACTTCAAG
CCCGGCAAGA AATCGCTGCT GCTGCAGGTG GCCGCGCCCG CGCTGGAGGA CACGCTGGCC
CGGGGCCAGG TGCTCAAGCT GCTGCCCAGC CCCGATCTCA TGCAGGGCAA GGATCCGCGC
AGCCAGCCAT TGCACGAGGC GCGCAGCCTG GAAGACCTGC GCGGCGCGCA CGCCGAAGAG
GCGCTGCAGC GGCGCGAGGT CTTCATCGAC CTGGAGCCGC TGGAGCTGGA CAGCCGCTTT
GTGGAGCTGT TTCGCGGCGC GCGCAATGCA CTGCAGGAAG GCGGCGCCAA CACCTTGTTC
GTGGCCCTGG GCTTTCTGGT CTGGAGCCGG CCCGACAAGC CCGATGTGCG CGTGCGCGCG
CCGCTGATCC TGCTGCCCGT CACGCTGGAG CGCAAGAGCG CGCGTTCGGG CTTCACGCTG
CAGGCGCATG AGGACGAGCC GCGCTTCAAT CCCACGCTGG TCGAGATGCT GCGCCAGGAC
TTCCAGCTGG AGCTGGGCGT GCCCGCAGGT GACCTGCCGC GCGACGAGGC CGGGCTGGAC
ATCGCCGGCA TCTGGGCCCG CGTGCGCGAG GCGATCAAGG ACGTGCGCGG CTGGGAGGTC
AGCGAGGACG TGGTGCTGTC CATGTTCTCC TTCGCCAAGT ACCTGATGTG GAAGGACCTG
GCCGAGCGCG CCGACCAGCT GCGCAGCTCG CCCGTGGTCG CCCACCTGAT CGACACGCCG
CGCGAGCCCT ATCGCTCGGA GATCGCCTTT CCCGACACGC GGCGGCTGGA CCAGGAGTTC
GCGCCGCAGC AGGTCTTCAG CCCGCTGCCG GCCGATTCAT CGCAGCTGTC GGCCGTGATG
GCCGCTGCGC GCGGCAAAGA CTTCGTGCTC ATCGGCCCGC CGGGCACGGG CAAGAGCCAG
ACCATTGCCA ACCTGATCGC GCAATGCCTG GCCGAGGACA AGCGCGTGCT CTTCGTGGCC
GAGAAAATCG CCGCGCTGGA CGTGGTCTAC CGCCGCCTGC GCGAAGTGGG CCTGGGCGAG
TTCTGCCTGG AGCTGCACTC CAACAAGAGC CGCAAGCTCG ACGTGCTGGG CCAGCTGCAG
AAATCCTGGG ACTCGCATGG CCAGGTGGAT GCCGAGGCCT GGGCCGCCAA GGCCAGCCAG
CTCGGCCGCC TGCGCGAGCA GCTGTCGGCC TATGTGCAGC ACCTGCACCG GCGCCACGCC
AACGGCTGGA CCATCTACCG CGCCATTGGC GCCGTGGCCG GTGGCGAGGC GCTGCCGCGC
CTGGGATTTC ACTGGCCCAC GCCCCAGGCC CATGACGAAG CGGGCCTGGC CCTTTTGCGC
GAGACTGCGG GCCGCCTGCA GGCCAATGCC CAGGCCGTGG GCACGCAGCA TCTGAAGGAC
GGGCCGCTGG CCACGGTTCA GGCCAGCGAC TGGTCCGTGC GCTGGCAGCA GCAGATGGTG
GATGCCGCCC AGGCGCTGCA CGATGCAGGC CAGGGCTTTG CCGAGGCGGC GCAGCAGCTG
GGCCGGCTGC TGCGCATCGA GTGGCCGGCG CTGGGGCGCC AGGCGCGCTC GGCGCTGGGC
GTGATCGCAC GGGCGCTGCC TGCGGCCGCA GGCCGCAACC TGGCTTTCTG CGTGCTGCCT
GACGGCGCGC GCATTGGCGA ATCCCTGCAA TCGGGCCTGC AGCTGCTGGC GCAGCACGGT
GATCTGTCCG CACAGATTCC GGCGCCCTGG CCGGCCGAGC TGCAGGCGCG CCTGGCCCAG
GCGCTGGACC TGCTGGCGCA GCGCCGGCGC CTGCAGGCCG GGCTGGGCAC CCCCTGGCCC
GTGGCCCTGG GCGACGAGCT GGAGCGCGGC CTGCAGTGCA TCGACGAGAT CGCGGCGCTG
CTCCAGGGCC TGTCCGTCAA GTACGGCGCG GGCGTGGGCC AGCTCAACGT GGCGCAACTG
CAGCGCGAAT GGGCCAGGGC CGGCAAGTCC TTGTGGCCGC TGTCCTGGCT GGGCCGGCGC
AAGGTGCGCG CGGCGCTGGA GGCCACCATC GAAGGCGCGG GCGAGCCGCG CGTGGCCGAT
GACCTGGCCG CCCTGGTGCG CATCCGGGGC CTGCGCGAGG AACTGGACCA GATCCAGCCG
GGCGCCGCAG CCGACGGCCT GTGGGCCGGA CACCGGACGC GCACCGACCA TGCGCGCAGC
GCCCTGAAGG CCAATGCGGC CCTGCTGGCC GCGCGTGCGC AGAAATCCTT CTCGCTCGAC
GGCCTGGAGG CCGTGGCCGA AGGCCATGGC GGCGAGCGCT GGGCTGCCGA AGTGCAGCGC
CTGCAGGCCC TGTACCAGAT CGACCGCCAG CTCGATGGCT ACCTGCCGCT GGCCGATGCC
AGCCACGGCC TGTGGCGCGG CCTGGAAACC GATGCCCAGG CCTTGCAGGA CGCGCTGGCC
TTCGAGCGCG AGCGCCTGCA ACTGACGCGG CGCGGCGGCC TGATGGCCTC GCACGCCGCC
GTGGCCCAGG GCCGCTGTGG CGCGGCACTG CAGCAGGCCC ATGCGCAGCT GGCGGCCCGC
AGCGCCATCG AGGAACAGCT GCTGGCGCTG GACGATCTGC GCTTGCGCTG CCCCGGCGTC
TGGGACGGCC TGGACACGCG CCCGCAAGCC GTGGAGCATG CGCTGCGCCT GCAGGGATCT
CTGCAGGCAG GGCTGACCGG GCTGGGCTGG CAGGAGGCCG AACTGGCCCA GGCACGCCAG
GCCCTGCACC AGGTGCTGGC CTTGCGCAGC GCCGAGCTGG GCGAGGGCGC CGCGATCGGC
ATGGCCTGCC AGCAGTTGCT GGACAGCCTG GCCGGCCTGC ACGCGGCCAT AGACCCCTTC
AGCGCGGCGG CAGCCCATGG CGAGCCGCAG CAGCGTGCCC TGGCCCAGCG CACGGCCGAG
CAGCTGGCGG CCACGGCGGG CGGCGTGCTG GCCGGGCAGG GCGGCCTGCA TGCCTGGTGT
GCCTGGCGCA ACGCCCAGGC CGCGGCCCGC GCGGGCGGGC TGGGTGCGCT GGCCGATGCC
ATCGAGTCCG GCAGCCTGAA GCCGGCCCAG GCGCCCCAGG CCTTCGAGGT CAACTACGCG
CGCTGGTGGC TGGCGCTGGC CGTGGACGAG GACGAGGTGC TCAAGCGCTT CGTCTCTGCC
GAGCATGAGC GGCGCATTGC CGACTTCCGC GCGCTGGACG ATGAATTCAC CTCGGTCACG
CGCCAGTGGA TACGTGCGCG GCTGTGCGCG GGCCTGCCGT CGGCCGACAG CATCCAGCGC
AACAGCGAGT GGGGCATCCT GCGGCGCGAG ATCACCAAGA AGCGCCAGCA CCTGCCGCTG
CGCCAGCTGC TGGAGCAGAT CCCCTCGGCC GTGCTGCGCC TGACGCCCTG CCTGCTGATG
AGCCCGCTGT CCATTGCCCA GTACCTGAGC GCCGAGACCA GCAACTTCGA CATCGTCATC
TTCGACGAGG CCTCGCAGAT CCCCGTCTGG GACGCCATCG GCGCCATGGC GCGTGCCAGG
CAGGTGGTCA TGGTGGGCGA TCCCAAACAG CTGCCGCCCA CCAGCTTCTT CGGCCGTGCC
GACACCTCCG ACACCTTCGA CGAGGACACG CAGGGCGTGG AAGGCGACAT GGAAAGCATC
CTGGACGAAT GCCTGGGCGC CAGCCTGCCC ACGCGCAACC TGTCCTGGCA CTACCGCTCG
CGCCATGAAA GCCTGATCGC CTTCAGCAAC CACCGCTACT ACGGCGGCGG GCTGGTGACC
TTTCCCTCGC CCGTCACGGA CGACCGCGCC GTCAGCTTCC ACGCCGTGCA GGGCCGCTAT
GAGAAGGGCG GCGCCCGCAT CAACCAGCCC GAGGCCAAGG CCCTGGTGGC CGACCTGGTG
GCGCGGCTGC AGTCGCCGGG GTTTGCGCAG TCGGGTGCCA CCATCGGCGT GGTCACCTTC
AACTCCGAGC AGCAAAGCCT GATCGAGGAT TTGCTGGACG AGGAGCGGCG CAAGGACCCG
GGGCTGGAGC CGTTTTTCTC CGATGCGCTG CTGGAACCCG TCTTCGTCAA GAACCTCGAA
AGCGTGCAGG GCGACGAGCG GGACATCATG TACTTTTCCA TCACCTACGG GCCCGATATC
TCGGGCGCCG TGTCCATGAA CTTCGGCCCG CTCAACCGCG ATGGCGGCGA GCGGCGGCTG
AACGTGGCGG TGACGCGCGC GCGGCAGGAG CTGCGCATCT TCTCCAGCCT GCGCGGCGAG
CAGATGGACC TGTCGCGCAC CCAGGCGGCG GGCGTGCGCG ACCTCAAGCA CTTCCTGGAA
TTTGCCGAGC GCGGCCCGCG CGCGCTGGCC GAGTCGCACC ATGGCAGCCA GGGCGATTTC
GACAGCCCCT TCGAGGCCAG CGTGGCCCAG GCGCTGGAGC GCAAGGGCTG GCGCGTGCAC
ACGCAGATCG GCGCATCCTC GTTCCGCGTG GACCTGGGCG TGGTGCATCC GGACCATGCG
GGCAGCTACC TGGCGGGCGT GGAGTGCGAC GGCGCCACCT ACCACCGCTC GGCCACGGCG
CGCGACCGCG ACAAGCTGCG CGAGCAGGTG CTGCGCGGCC TGGGCTGGCA GATTCTGCGC
ATCTGGTCCA CGGACTGGTG GGTCAACCCG GGCGGCACAC TGGAGCGCAT CCACGCGGCG
CTGACCGCGC TGCTGGAGCA GGACCGGCGC AAGCGTGCGG CCGAGGTTGT TGAGGTGCCG
CAGGCGGCCG CAGTCGCCGG GGCAGAGCCA GCGCCAGAGA CGCCTGAGGC GTCCGAGGCC
TCCGCGTCCT CCGAGGCATC CGTGGAGGAT GGCGAGGCGC AGAAGGCGTG A
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| Protein sequence | MTEDPRRDSP ADAAPAAAQA PQTAPQLRIG TVAKLNLADF QNAVPALLEL AIVNEGELPL
QALSLHLASE PAFIKPRTWR LESVAAHSTY ALTDLDVALD GALLSRLTEA EPAVLRLELR
SGQPAETVLA RHEHPLELLA RNQWGGLGHL PEMVTAFVQP NDPAVDRILK GAAQALESAG
KSGAINGYEQ GPQRAWELAS AIWTSVLQKK LNYALPPASF EHAGQKIRGA TQVLDAGLAT
CLDLTLLFAS CLEQAHLNPL LVFTRGHAFV GLWLGRQEFS TAVVDDITAV RKRLKLQELV
VFETTLAAQG QAVAFSQAIA QGARQLAEEH EDQFELLVDV RRARMQRIRP LALAQPQDTA
PEAGEGQAEP RLTVEPPPEL LAQAQAREVP TSQLDPKDRL ARWQRRLLDL SLRNALLNFK
PGKKSLLLQV AAPALEDTLA RGQVLKLLPS PDLMQGKDPR SQPLHEARSL EDLRGAHAEE
ALQRREVFID LEPLELDSRF VELFRGARNA LQEGGANTLF VALGFLVWSR PDKPDVRVRA
PLILLPVTLE RKSARSGFTL QAHEDEPRFN PTLVEMLRQD FQLELGVPAG DLPRDEAGLD
IAGIWARVRE AIKDVRGWEV SEDVVLSMFS FAKYLMWKDL AERADQLRSS PVVAHLIDTP
REPYRSEIAF PDTRRLDQEF APQQVFSPLP ADSSQLSAVM AAARGKDFVL IGPPGTGKSQ
TIANLIAQCL AEDKRVLFVA EKIAALDVVY RRLREVGLGE FCLELHSNKS RKLDVLGQLQ
KSWDSHGQVD AEAWAAKASQ LGRLREQLSA YVQHLHRRHA NGWTIYRAIG AVAGGEALPR
LGFHWPTPQA HDEAGLALLR ETAGRLQANA QAVGTQHLKD GPLATVQASD WSVRWQQQMV
DAAQALHDAG QGFAEAAQQL GRLLRIEWPA LGRQARSALG VIARALPAAA GRNLAFCVLP
DGARIGESLQ SGLQLLAQHG DLSAQIPAPW PAELQARLAQ ALDLLAQRRR LQAGLGTPWP
VALGDELERG LQCIDEIAAL LQGLSVKYGA GVGQLNVAQL QREWARAGKS LWPLSWLGRR
KVRAALEATI EGAGEPRVAD DLAALVRIRG LREELDQIQP GAAADGLWAG HRTRTDHARS
ALKANAALLA ARAQKSFSLD GLEAVAEGHG GERWAAEVQR LQALYQIDRQ LDGYLPLADA
SHGLWRGLET DAQALQDALA FERERLQLTR RGGLMASHAA VAQGRCGAAL QQAHAQLAAR
SAIEEQLLAL DDLRLRCPGV WDGLDTRPQA VEHALRLQGS LQAGLTGLGW QEAELAQARQ
ALHQVLALRS AELGEGAAIG MACQQLLDSL AGLHAAIDPF SAAAAHGEPQ QRALAQRTAE
QLAATAGGVL AGQGGLHAWC AWRNAQAAAR AGGLGALADA IESGSLKPAQ APQAFEVNYA
RWWLALAVDE DEVLKRFVSA EHERRIADFR ALDDEFTSVT RQWIRARLCA GLPSADSIQR
NSEWGILRRE ITKKRQHLPL RQLLEQIPSA VLRLTPCLLM SPLSIAQYLS AETSNFDIVI
FDEASQIPVW DAIGAMARAR QVVMVGDPKQ LPPTSFFGRA DTSDTFDEDT QGVEGDMESI
LDECLGASLP TRNLSWHYRS RHESLIAFSN HRYYGGGLVT FPSPVTDDRA VSFHAVQGRY
EKGGARINQP EAKALVADLV ARLQSPGFAQ SGATIGVVTF NSEQQSLIED LLDEERRKDP
GLEPFFSDAL LEPVFVKNLE SVQGDERDIM YFSITYGPDI SGAVSMNFGP LNRDGGERRL
NVAVTRARQE LRIFSSLRGE QMDLSRTQAA GVRDLKHFLE FAERGPRALA ESHHGSQGDF
DSPFEASVAQ ALERKGWRVH TQIGASSFRV DLGVVHPDHA GSYLAGVECD GATYHRSATA
RDRDKLREQV LRGLGWQILR IWSTDWWVNP GGTLERIHAA LTALLEQDRR KRAAEVVEVP
QAAAVAGAEP APETPEASEA SASSEASVED GEAQKA
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