Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4387 |
Symbol | |
ID | 5749975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4803642 |
End bp | 4804598 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641299490 |
Product | extracellular solute-binding protein |
Protein accession | YP_001565403 |
Protein GI | 160899821 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.974956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCCTGG CAGCCATCCC CAGATTTACA TCACAGACCA AGCAGGAAGA CCACATGCCC ATCAAATCCA TTCTGAAATC CACCGTGGTG ACGCTGGCGA TCGTGGGCAG TGGATCGCTT TTTGCGCAGG GCGCACCCCT GAACACAGCG GCGTTTGACG CCCTGGTGGC GCAAGGCCCC GTGGCCGACG CCGCGACCAT CGCATCGAGC ACCTGGGCCA GCAAGATCAA GCAGACCGGC ACGCTGCGCC TGGGCAGCAC CCAGACCTCG AATCTGTTCT CCCTGCTCAA CGAGAAGGAC GGCAAGATCC GCGGCTTCGA CGCAGGCCTG GCCCAGCTGC TCACGCGCTA CATCCTGGGC GATGCGTCCA AGTACCAGTT CGCACAGGTG ACCTCGTCCA CGCGCGAGCA GGTGCTCATC AACAACCAGG CGGACATGGT GATCGCCACC TACTCCATCA CCCCCGCACG TGCCGAGAAG ATCTCGTTTG CCGGCCCCTA CTACACCTCG CAGGCCGGGG TGCTGGTCAA GGCAAGCAAC AAGACCGTGC AGTCCTACAG CGACCTGGCA GGCAAGAAGG TGGCCACGCA GGCCGGCTCC ACGGGCCCCG CCATCCTGGC GCAGCACGCG CCCAAGGCGG TCGTGCAGGA GTTCCAGACC CACCAGGAGG CGCTGGACTC CCTGCGCCAA GGCCGTGTGG ATGCCTATGT GACCGACTAC ACCCTGCTGC TCAACACCCT GAGCCTGGGC ACCGGCGACG CGCGGCTGGC AGGCGCGCCC TTTGGCGCCC AGGATTCCTA CGGCATCGGC CTGCCCAAGG GCTCGGACGG CGTGGCCTTC ATCAACGCCT TCCTGAAGAA AATCGAAGCC GATGGCACCT GGGCCAAGCT CTGGACCATC TCCATCGGAC AGCGCACCGG CAGCACGGCC GTTCCCACGC CGCCCGCCCT GCCCTGA
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Protein sequence | MPLAAIPRFT SQTKQEDHMP IKSILKSTVV TLAIVGSGSL FAQGAPLNTA AFDALVAQGP VADAATIASS TWASKIKQTG TLRLGSTQTS NLFSLLNEKD GKIRGFDAGL AQLLTRYILG DASKYQFAQV TSSTREQVLI NNQADMVIAT YSITPARAEK ISFAGPYYTS QAGVLVKASN KTVQSYSDLA GKKVATQAGS TGPAILAQHA PKAVVQEFQT HQEALDSLRQ GRVDAYVTDY TLLLNTLSLG TGDARLAGAP FGAQDSYGIG LPKGSDGVAF INAFLKKIEA DGTWAKLWTI SIGQRTGSTA VPTPPALP
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