| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4344 |
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| Symbol | |
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| ID | 5749932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4756483 |
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| End bp | 4758126 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299447 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001565360 |
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| Protein GI | 160899778 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.162521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0144211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACG TGCTGATCGT CGATGACGAT GCGGATTCCG CAGCGACCAT GCGCGAACTC
GTGGGCGTGG ACCGCTTCTC GGTCGCCGTG GCCCACACCC TGCGCGACGC GCGCCGGCAG
ATGGCCATGC AGCCGCCCAG CCTGGTGCTG CTGGACCTGC AACTGCCCGA TGGCAACGGC
ATGGACCTTT TTGGCGACCA GCAGGTGCCG CAGGACTCGC AGATCGTGCT GGTGACCGGC
CACGCCAGCC TGGACTCCTC CATCGAGGCC CTGCGCCGCG GCGCCATGGA CTATCTGGTC
AAGCCCGTGG GCATCGGGCG GCTGGAGGAC ATTCTTTCGC GCTTTCTGAT CCCCACGGCC
GGCCTGCCGG AGACGGGCAC CAGCACCGTC ACGGGCGCGG CCTTCGACCA GATCACCCCG
CAAGACAGGC CCGGCGCCGG CTACTGCGCG CAGGAAGGGC GCTTTGGCCG GCTGTGGGGC
GGCTCGGCCC CCATGCAGCG GCTGTACCAG CAGATGGAGC GCGTGGCGGG CACCTCGGTC
ACGGTCTTTC TGACGGGCGA AAGCGGCACC GGCAAGGAAG TCGTGGCACA GACCCTGCAT
GAGCTGAGCC AGCGGCGCAG CCGGCCCTTC CTGGCGGTCA ATTGCGGTGC CATTTCTCCG
CACCTGATCG AAAGCGAGAT CTTTGGCCAC GAAAAGGGCA GCTTCACCGG CGCCGACCGC
CAGCACCAGG GCTTTTTCGA GCGCGCGGCC ACGGGCACGC TGTTTCTGGA CGAAATCACG
GAAATGTCGA TGGAGCTGCA GGTCAAGCTG CTGCGCGTGC TGGAGACCGG GCGCTTCATG
CGCGTGGGCT CCACCCAGAC GCTGCAGACC GATGTGCGCG TGATCGCCGC CACCAACCGC
TGCCCCTACG AGGCCGTGGC CAGCGGCAAG CTGCGCGAAG ACCTGCTGTA CCGCCTGAAC
GTCTTCCCCA TCGAGCTGCC GCCGCTGCGC GAGCGCCTGA CCGACGTTCC GCTGCTTGCG
CAGCATTTCA TGGAGGCCAT CTCCCAGCGC GAGGGCCAGG CCAAGCAATT CACGGCATCG
GCCCTCAAGC AGCTTGCGCA ATACAGCTGG CCCGGCAACG TGCGCGAGTT GCGCAATGCC
GTGCAGCGCG CCTATGTGAT GGAGCCCGGC CCGCTGGTGG GCCAGGAATG GCTGCCCCGG
CCGCCCGTGG CCATTGCCCA GCAGCCGGTC CCGGTGCATC CGGCCGCCCA CGCCCTGCAC
CTGCAGCAAG TGCCTCAAAT GCCGCAAATG CCACATATGC CGCAGGCGCG GTCCATGCCA
ATGAGCGCGC CATTGAACGC GCCAGTGAGC GCGCCACTGA CCGCCCCCAT CACCCCCACC
ATCACAGCGC ATGCGCCCGC CGACCACGCC CATGCAGTCG CCACCTACGA CCTGCCCGAC
ACGGAGCCGG CCACCATACA GCTGCCCATC GGCATGACCA TGGCGCAGGC CGAGCGGCTG
CTCATCCAGG CCACGCTCAA GCAGTGCAAG TACCAGAAGG AACGCACGGC AGCCGTGCTC
GGCATCAGCC TCAAGACCCT GTACAACCGG CTCAGGGACT ATGCGGGCGG CAAAAAGGGC
GAGACGGACG CCGAGCACGG CTGA
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| Protein sequence | MNHVLIVDDD ADSAATMREL VGVDRFSVAV AHTLRDARRQ MAMQPPSLVL LDLQLPDGNG
MDLFGDQQVP QDSQIVLVTG HASLDSSIEA LRRGAMDYLV KPVGIGRLED ILSRFLIPTA
GLPETGTSTV TGAAFDQITP QDRPGAGYCA QEGRFGRLWG GSAPMQRLYQ QMERVAGTSV
TVFLTGESGT GKEVVAQTLH ELSQRRSRPF LAVNCGAISP HLIESEIFGH EKGSFTGADR
QHQGFFERAA TGTLFLDEIT EMSMELQVKL LRVLETGRFM RVGSTQTLQT DVRVIAATNR
CPYEAVASGK LREDLLYRLN VFPIELPPLR ERLTDVPLLA QHFMEAISQR EGQAKQFTAS
ALKQLAQYSW PGNVRELRNA VQRAYVMEPG PLVGQEWLPR PPVAIAQQPV PVHPAAHALH
LQQVPQMPQM PHMPQARSMP MSAPLNAPVS APLTAPITPT ITAHAPADHA HAVATYDLPD
TEPATIQLPI GMTMAQAERL LIQATLKQCK YQKERTAAVL GISLKTLYNR LRDYAGGKKG
ETDAEHG
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