| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4247 |
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| Symbol | |
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| ID | 5749835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4647423 |
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| End bp | 4648877 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641299350 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001565263 |
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| Protein GI | 160899681 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0143571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.053898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC GCGCACTGGC CATGGCCATC GCCTGCGCCG CCGCGCTGGC CGGCTGCAGC
GTGCCGCCGC TGAGCACCGC GCCCGAAGCG GCCCGGCCCG CCATGCCCGC CCAGTGGAGC
GGGGCAGGGC AGGAGCCGGC CGCCGCCGTC CAGGCATCGT GGTGGCAGGC CTTTGGCGAT
CCGCTGCTCA CGCGCTGGGT GGAGCTGGCC CAGTCCCGCA ACAACGATGT GCTGCTGGCC
CTGTCGCGCG TGGATGAGGC GCGGGCCAAC CTGGATGTGG CAGGCGCTGC GGGCCTGCCC
CAGCTCTCGG CCACGGCCGG CGCCTCCACG GGCCGCAGCC TGGGCGCGCG GGGCCTGGCG
CACACGCGCT CGGTTCAGCC CGGCCTGCAG GCCAGCTGGG AGCCTGATCT GTGGGGCCGC
ATCGCCCACC TGGAAAAGGC CGCCGCCCTG CGCCTGCAGG CCAGCGAGGC CGACCGCGAC
GCCGTGGCCC TGGCCGTGGC CGCCACCACG GCCCAGGCCT ATGTGGGCCT GCGCTCGCTG
CAATCGCAGC TGCAAGTGGC CCAGGCCACG GCCCGCTCGC GCGAACAGGC CCTGCGCCTG
GCCGATGAGC AGGCGCGCGT CGGCTACACC TCGCAGCTAC AGCTCACCCA GGCGCAGGCC
GAGCTGCAAT CCGTGCAGCA GGCCGTGGAG CAGCTGGAGC TGTCGCTGGC GCGCCAGCGC
ACGGCGCTCC TGCTGCTGGC CGGCGGCGAG GGTGACGAGC AGGCAGCCGC GCTCATGGCA
ACAACCGACA GCCAGTCCGC TGCGCTGGGC GCACCGCCGC CTGCACCGGC CGCCGGCCTG
CCTTCGGCCT TGCTGCAGCG CCGCCCCGAC ATTGCACGGG CCCAACTGCA GCTGGCGGCC
GCCGACGAAA GCCTGGCCGT GCAGCGCACC GCCTTCCTGC CCCAGGTCTC GCTGACGGCC
AGCGCCGGCA GCCTGCTGGT CAACGCCCTG CAATACCACC CGGCTACGGT CTGGGCCCTG
GGCGGCAGCG TGCTGGCGCC GCTGTTCACG GGCGGCCGGC TGCAAGGGCA GTTCGACGCC
GCCGCCGCCC AGCGCGACCA GGCCGCCTAT GCCTACCGTG GCGTGGTGAT CAAGGCCCTG
GCCGATGTGG AAAACGCCCT GGTGGGCACC CAGCGCCTGC AGTCGCAGTG GCAGCACGCC
AGCGAGCGCG AGGCGGTGCT GCAGCGCTCC CTGGGCTTTG CCAAGGACCG CTACGAGGCC
GGCTACGCCA GCTACCTGGA AGAGCTGGAC GCCCAGCGCA ATCTCTTCCA GGCGCAGCAG
GAGGTGATAC GCCTGCGCCA GAGCCAGCTG GAAAACGCCA TTGCGCTGTA CCAGGCGCTG
GGCGGCGGCT GGCAGGCCGC CACCACACCA GTCGCTGCAA CCGTCACTGC ACCTGTCGCC
AGCCCCGCCC GCTGA
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| Protein sequence | MTARALAMAI ACAAALAGCS VPPLSTAPEA ARPAMPAQWS GAGQEPAAAV QASWWQAFGD
PLLTRWVELA QSRNNDVLLA LSRVDEARAN LDVAGAAGLP QLSATAGAST GRSLGARGLA
HTRSVQPGLQ ASWEPDLWGR IAHLEKAAAL RLQASEADRD AVALAVAATT AQAYVGLRSL
QSQLQVAQAT ARSREQALRL ADEQARVGYT SQLQLTQAQA ELQSVQQAVE QLELSLARQR
TALLLLAGGE GDEQAAALMA TTDSQSAALG APPPAPAAGL PSALLQRRPD IARAQLQLAA
ADESLAVQRT AFLPQVSLTA SAGSLLVNAL QYHPATVWAL GGSVLAPLFT GGRLQGQFDA
AAAQRDQAAY AYRGVVIKAL ADVENALVGT QRLQSQWQHA SEREAVLQRS LGFAKDRYEA
GYASYLEELD AQRNLFQAQQ EVIRLRQSQL ENAIALYQAL GGGWQAATTP VAATVTAPVA
SPAR
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