Gene Daci_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4242 
Symbol 
ID5749830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4641054 
End bp4641455 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content72% 
IMG OID641299345 
Producthypothetical protein 
Protein accessionYP_001565258 
Protein GI160899676 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0620829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.129343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA GCCGTTCTCC CGCCGCTTCC ACCGCCTCCA GCGACTGGAG CGACCTGTTC 
CCCGCCCGGC CGGATGCGTC GCCGCTGCGC ATCGTGCTGC ATGCGCCCAC ACCCGGCGCC
CTGGCCCGTG CACGCAGCAA TCTGGCCAAT CTGCGCCAGG ACCGGCCCGG TGCCGAAGTC
CGCATCGTCA TCAACGGCCC GGCCGTCGAG GCGCTGCTGG ACGCTGCGCC GGGCACGCCG
CAGCATCTGG ATGCGGCCGC CCTGGCCCAT GCGCTGGTCT GCCCGAACAC GCTCAGGAAG
CTGGGCCGCG AGGCGCCTGC CGGCATGCGC GTGCTGCCGC AGGGCGGGAT CGAGTCACTG
GCCCTGCTGC AGCAGTCGGC CTGGTGCTAC GTGCGCTGCT GA
 
Protein sequence
MSTSRSPAAS TASSDWSDLF PARPDASPLR IVLHAPTPGA LARARSNLAN LRQDRPGAEV 
RIVINGPAVE ALLDAAPGTP QHLDAAALAH ALVCPNTLRK LGREAPAGMR VLPQGGIESL
ALLQQSAWCY VRC