| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4235 |
|---|
| Symbol | |
|---|
| ID | 5749823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4633314 |
|---|
| End bp | 4633943 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641299338 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001565251 |
|---|
| Protein GI | 160899669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00996764 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.427683 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGGT TTGCCGAGGA AACCATGACC CAGACCTTGG ACGACATTCA GCAACTGGCG
CATGAGCACC AGGTGCTGCT GCGTGGCTAC GGCCACGCCC AGTTGCGCAG CAGCGAGCTG
CTGTGCCTTC AAGCCCAGGA AATAGAGAGG CTGCAAAGGC TGGTGATCCG CCAGCGTGCG
GCCTTGATGG CCAAGGAAAC CCAGCTGCTG TGGGCGCGCG AGGAGCGCGA GGCGCTGGAG
AAGGCCATTC CCGGCCTCTC GCGCCGCGTC ACGCTGGCAC GGCGCGTGGA GTCGCTGCTG
GTGCGCGTGC AGGACCTGCT GCGCGAGCGT GCACGCTGGC AGCGCCAGAC GGCCGCGCCC
CTGGCCCAGC CCGCCATGCC TGCGCGGGAG CCCGAACAGG ACGCCGAGGC CTTCGAGGCC
AGCCTGCGCG AGGCCGATCT GGTGATCTGC CAGACCGGCT GCCTGAGCCA CGGCGAGTAC
TGGCGCGTAC AGGACCATTG CCAGCGCACG GGCAAGACCT GCGTGCTGGT GGAGCAGCCC
GATGCGCTGC GCATTGTCCG CATACACCGG GGTGCCGAAG GCGGCGACAA CCCCGCCATG
ACACTGACAC ACGGAGACAC CACCGCATGA
|
|---|
| Protein sequence | MLRFAEETMT QTLDDIQQLA HEHQVLLRGY GHAQLRSSEL LCLQAQEIER LQRLVIRQRA
ALMAKETQLL WAREEREALE KAIPGLSRRV TLARRVESLL VRVQDLLRER ARWQRQTAAP
LAQPAMPARE PEQDAEAFEA SLREADLVIC QTGCLSHGEY WRVQDHCQRT GKTCVLVEQP
DALRIVRIHR GAEGGDNPAM TLTHGDTTA
|
|---|
| |