Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4215 |
Symbol | |
ID | 5749803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4616589 |
End bp | 4617152 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641299318 |
Product | putative membrane-associated protein |
Protein accession | YP_001565231 |
Protein GI | 160899649 |
COG category | [S] Function unknown |
COG ID | [COG5612] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0405872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGA ACGAATCCCC CATCGGCGAT GCCCCCCGCA CGACGCACCT GCGCCGCTGG CTGTGGGCCT CTGCCCTGCT GAATCTGTTT CTGGTGGGCG GCATTGCCGG TGGCACCTGG CGCTGGTGGG CGCACCAGGC CGAGGCCAGG TCGGTAGCCA CGTCCACGCA GACAGGAACA CCCACCGGAG CACCGGCGGG CAGCTCCCCG GCCACTGCGC GCGGACTGCG CTTTGCCGCA GACGGCCTGC CGCCCGAGCG GCGCCAGGCT TTCCGCACAG GACTGCGTGA AGTGCGGCGC GAGGCTGCTG CGCTGACCCA AGGCAGCCGC GAAGGCCGCG CCGAGGTGGT TCGCCTGCTG GCTGCGCCGC AGTTCGACCG CGCTGCCGTC GAGGCTGCAT TGGCACGTAC CCGGGCCGCC GACACGGCGG TGCGCGAGCG CGTGGAGGCG CACGTGGTCG ACTTCGCGGC CCAGCTCACG CCGGCCGAGC GACAGACACT GGTGCAGGGG CTGGCAGCGC AGCAAGGCCC CTTCCATGTG CCCGCATCTC CGGCCAGGCG CTGA
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Protein sequence | MTMNESPIGD APRTTHLRRW LWASALLNLF LVGGIAGGTW RWWAHQAEAR SVATSTQTGT PTGAPAGSSP ATARGLRFAA DGLPPERRQA FRTGLREVRR EAAALTQGSR EGRAEVVRLL AAPQFDRAAV EAALARTRAA DTAVRERVEA HVVDFAAQLT PAERQTLVQG LAAQQGPFHV PASPARR
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