Gene Daci_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4196 
Symbol 
ID5749784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4593915 
End bp4594631 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content57% 
IMG OID641299299 
Producthypothetical protein 
Protein accessionYP_001565212 
Protein GI160899630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0289513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTT GGAAAAGTTT TGGGGCAAGC GTTCGCGGCC CGAGCCATAT CGCCGAAGGT 
TTGCCAAATC AGGATGCATG GGCGAAGTTT CACCATGTTT GGGGTGATGG CATCGTCGTG
TCCGACGGAG TTGGCTCCAA GCCCTTCTCC AGCTTCGGCA GCCATGCTGC CTGTCTCGCC
GTCGAGTTCG CAGCCCGGGC TTGTTGCACC GGTGGTGAAA TCGAACACAA CGCGCTGTTT
AGCAACATCC AAGCTAACTG GCTGAGGCTT GTCGCTCCGC TGGAACCTCG CGATTGCGCG
GCCACCTGTC TCTTCGCACT ACACCTGGAT GGCGTAATCC ACCTAGGGAT GCTTGGCGAC
GGACTTGCCG CTATTGCCAA GTCCGATGGA TCAGTGGTTT CGCTGTCGGA AAACAAGACG
CAAGGCTTCT CCAATATCAC TACTGCGCTG TCCTCCAAGG TCTCCGCCAA AGACTGGCAG
TATTTGTCGC TGCCGGGGGA GCAGTGCATC GCAGTATTGC TCTGCACCGA TGGGGTGGCT
GACGATTTGG ATAACGCTGA CGGGTTTGTG AGCAGTTTCG CCGAAACGCA TCGAACCCTC
GCACCGGTAA GTGCCAACCG GCGCATCCAC GAGATGCTCG AAAACTGGCC CACGCCCAAG
CACAGCGACG ATAAAACCCT CGCCTGCCTG TGCAGTGAGG AGGTTGCAGA TGAGTAA
 
Protein sequence
MTLWKSFGAS VRGPSHIAEG LPNQDAWAKF HHVWGDGIVV SDGVGSKPFS SFGSHAACLA 
VEFAARACCT GGEIEHNALF SNIQANWLRL VAPLEPRDCA ATCLFALHLD GVIHLGMLGD
GLAAIAKSDG SVVSLSENKT QGFSNITTAL SSKVSAKDWQ YLSLPGEQCI AVLLCTDGVA
DDLDNADGFV SSFAETHRTL APVSANRRIH EMLENWPTPK HSDDKTLACL CSEEVADE