| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4084 |
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| Symbol | |
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| ID | 5749671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4491906 |
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| End bp | 4495661 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641299186 |
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| Product | lambda family phage tail tape measure protein |
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| Protein accession | YP_001565100 |
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| Protein GI | 160899518 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5281] Phage-related minor tail protein |
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| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family
[TIGR02675] tape measure domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.622569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0282318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATG AAGTTGCAAG CCTGGGCGTG AAGGTCGATG CATCTGGCAT CGAGAGCGGG
ACGAAAGCCC TTGATGCGCT CGCTCAGCAA GGCCCAAAGG TTGAGCAGGC GATGGCTGGC
GTTGAGGGCG CTGCCGTCAA GACCGGGAAG TCCCTCAAGA CGATGGGCGA TGGATCTGCA
AAAGGTCTGG ACGAGATCGG CAGGAGCGCG CCGAGGGCAG CCGAGAGCCT TGGCCGTGTC
GCCAAAAGTG CTGAAGATGC CACGCGTGCA TTGGCAGGGA TCAATGCGTC CGTGGCCAGC
CTGGGCCAGG TCACTACTGT TGCCGGCCAG TCAGCACGTG GCATAGCTGG ATTCAGTGCA
AGCCTGCAGG CATCTCAAAA GAGTCTGACT GACATGCAGG CTCAAGTGCG CGCTACCTCT
ACTGTCGTGG CTCAGTTGAG CACCGCATTG ACCGCCACTG TCCCGGCAGC CCAGGCAGCC
GCAAAAGCCC AGGCAGACGC CGCGAAAAGC GCGGTAGACA TGAGCGCTGC ATTCAAGTCT
GCCAGTGACC AGTTCCGCGC GTATTCGACG GTTGCCGTCA GTGCCTCGGA TGCTGGGCAG
AAGGCGGCAA AGTCCATGGA TACGACCGCG ACGGCCGCCC GTGCACTTAC CTCAGCCATG
GCTATGGTGG GCGTTGGCTT CGGCGCGCAA GAGCTGATCA CCCTCGCAGA CGGATATGGA
AAGGTTACGG CCCAATTGCG CCTTGCTACC AACGGGGCAA GCGACTACGC GGCTGCAATG
GAGTCTGTCC GCCGGATCTC TCGGAGCGCT CAGCAGGGCC TGGGGGAAGT GGGAACCCTT
TACGCGCGGA TCGCCAACGG TACTGCGGAA CTCGGCATCA GCCAGCGCCG ACTCTCTGAG
ATTACCGAGG TGGTTGCCCT GTCGCTGCGC GCGAGCAATG CCACCGCCTC CGAGGCTTCC
TCGGCCATGC TGCAGCTTTC TCAGGCATTC GCTTCGGGCG TGCTGCGAGG CGAAGAGTTC
AATGCGGTCA ATGAGGCAGC GACTCGCCTT ATGAAGGCTC TTGCCGACGG CATTGGCCAG
CCGGTTGGCG CTCTACGCAA GATGGCGGAA GAGGGAAAGC TGACCGCCCA AGTGCTGGCC
ACTGCGCTGC CCAAGGCATT GGAGGAAGTC CGCATCGAGG CCGCCAAGAT GCAGACCATC
GGAGGCTCTT TCACCGTGCT CAAGAACTCC ATGATGGAAT TCTTCGGCAC GACGGCGCAG
TCGTCTGGAG CTGTCTCCGG CATCACAACG TCGGTAGAGC TGCTGGCCGA CAATTTGAAC
CTGTTGACGG CTGCAGCTAT TGGCTTTGGT GCGACGAAAC TCTCCCAGTT CATGGTGACA
GCCGGAGCGG CTGCAACCAA GAACGCGACC GATACGATTG CATATGTCGC AGCGCTGAAC
CAACAGCGCG CTGCAGCCAT TGCAGCGGCA GAGGCTGAGG CTGCTGTGAG CGCTGCCCGT
GTGGCAGGGC TGAGTGCTCT GCAGGCCAAG CTGGTCGCAG AGCGCCAGGC CGCGCTGACA
GAGGCATCTG CTGCCACCAG TACAGCTGCC CGTACCCAGG CGCTTATGGC CGCCTCGGTT
GCGGAGCTGA ACCTAACGCG GACATCGGCT CAACTCACGA CGGCTACCGT TGCCCAGACT
GCCGCGCAGA CAGCGCTCAC GGCTGCAGTC ACTGCGACAA GCACAGCTGC GACCGTTGCA
TCCAGGGCGT TGACGCTGGT TGGCGGCCCT ATCGGGCTGA TCACCACCGC CTTGGGCTTG
GGGGTGACTG CCTGGGCGGC CTGGGGCAGC AGCGCGGAGA GTGCATCGGC CCAGGCAAAA
AACGCCATCG TTTCCGGTCA CCAAGACATC GTAAGTCGTC TTGATGAGCA GATTAGGAAA
CTGTCACAGC GCGCCGGGCT GCTGGCCATA GGCAACGTGG CTGCTGCGCG CGATGAAGAT
CCGGCAGCCC AAGAACTGGG GCGCCTGAAT TCGCGCATTC AGGAAATGCG GGCGCAAGGC
GCATCTCTCA GTGGACCCGA CCAAATCGTA TTGATCGAAC TTCAGCGCCA GTATGAAAAC
CTGAACTCAT CCTTGGAAAA GCGCAAGGGC CTGCAGGAGC AGATCAATGG CCTTGGTGTT
CAAGACCGCT TGAACGCACT GGAGATGAAG AAAGGCGGTT TCTCGAAGGA TTGGCTCGAA
GAACTCAAGA CTCGCCAAGA TGCCCTGAAG GCTGGGATCA TCACCGCCAA GGAGTATGCG
GCCGCCGTCA ATGAGATGAA CAAGCGGCGT TACGAGTCCA CGGCTGAAGG CAAGGAGGCT
GCAAAGCTGG CTAGGGCTGG CAAGGCGGGA GCCGGGCGCA TCGCCAAGGC GGACCTCTCC
TCCGACCTAG CCGACATCCA GATCCAGTAC CGCATGCTGA CCACGGCCTC GGGCAATGCC
GAGCGCCTGC TTGACGCGCA GCGGGCCGCC GGCCTGGTGA GCGAGCGCGA GTACTACGCC
CAGAAGCGCA AGTTCGTGGA GGACAACGCC GCGCTGCAGA TCCGCGAGTT GGAGGACGAG
AACAAGCGGT ATGCCCAGCA GGCCGCGACC GGCGCCGACA AGATCAACAA CGAGAAGAAG
ATCGCCCAGA ACACGGCGAA GATGGCCGAG ATCCGCGCCA AGGCGGACAC CGACATCAAG
ATCTCGACGT TGCAGCAGGA AGAGGCCAAC CGCCAGTTGG AGGCCTCGTA CAAGGCCTTG
GAGCAGTCCA TGGCCGGCTA CCTGAAGACC AGCGCCGACC GCTACCAGCG AGAGCTGCAG
GGCATGGGCC TGGGCAACCA GTGGCGTGAC CAGAACGCGG CCGCGAACCA GATCAACGAC
CGCTACGAGA GCCAGCGCAA CGACCTGCGG AACAACCGCG AGCGGCTGGA GCTGGAAAAG
AAGTGGAACT CGGACCTGGA GGAGCAGTAC CAGCGCCGCC TGGAGATCAT CAACGATGCG
AACCAGAAGG CTCTGGGCCT GGATGCCGAC TACTGGCGCC GGCGGCTGCA GATGCAGCAG
GACTGGACGG TGGGCGCGTC GGAGGCGCTG ACCAACTACC TGAACGATGC CAACAACACG
GCCGCGCTCA CGGAGAAGGC CTTCACGAAC GGAATCTCCG GGATGGAGGA CGCGCTGGTG
AGCTTCGTCA CGACGGGGAA GCTCAGCTTC AGCCAACTGG CGAACAGCAT CATTGCCGAC
ATCACCCGGA TCATCATCAA GCAGCAGCTA GCCGCGGCGA TTGGTGGTGC TGGTGGCTCG
AACTGGCTGG GCGGTCTGGT GGGTGGCCTG TTCGGCACCT CCGGCACGGC GGCCGTGGCC
AACGTGTTGC CGGGGAACCC GCTCGACAAC CTGCTGAACC TCACAGGCAA CTTTGTGGCC
AACGCAAAGG GTGGCGTCTA CGACAGCCCC AGCCTGAGCA TGTACAGCAA CCAGGTGCAC
AGCACCCCGA AGGTCTTCGC CTTCGCGAAG GGCGCTGGTG TGTTCGCCGA GGCCGGGCCG
GAGGCAATCA TGCCGCTGAC CCGGAACTCG GCCGGCGTGC TGGGCGTGCG CGCCATGCGC
GATACGGCTG GCGGTGATGG CGCGGGCAAC TCGCGCAGGG CAGCCGCGCC GATCAACATC
AACATTCCAG TTGCAGGGCA AGTGGATCGT CGCACCAAAG ATCAGTTGGC CTTCAGGGCC
TCCCAAGAGC TGCGGCGCGT GCAGAGGTTT TCATGA
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| Protein sequence | MANEVASLGV KVDASGIESG TKALDALAQQ GPKVEQAMAG VEGAAVKTGK SLKTMGDGSA
KGLDEIGRSA PRAAESLGRV AKSAEDATRA LAGINASVAS LGQVTTVAGQ SARGIAGFSA
SLQASQKSLT DMQAQVRATS TVVAQLSTAL TATVPAAQAA AKAQADAAKS AVDMSAAFKS
ASDQFRAYST VAVSASDAGQ KAAKSMDTTA TAARALTSAM AMVGVGFGAQ ELITLADGYG
KVTAQLRLAT NGASDYAAAM ESVRRISRSA QQGLGEVGTL YARIANGTAE LGISQRRLSE
ITEVVALSLR ASNATASEAS SAMLQLSQAF ASGVLRGEEF NAVNEAATRL MKALADGIGQ
PVGALRKMAE EGKLTAQVLA TALPKALEEV RIEAAKMQTI GGSFTVLKNS MMEFFGTTAQ
SSGAVSGITT SVELLADNLN LLTAAAIGFG ATKLSQFMVT AGAAATKNAT DTIAYVAALN
QQRAAAIAAA EAEAAVSAAR VAGLSALQAK LVAERQAALT EASAATSTAA RTQALMAASV
AELNLTRTSA QLTTATVAQT AAQTALTAAV TATSTAATVA SRALTLVGGP IGLITTALGL
GVTAWAAWGS SAESASAQAK NAIVSGHQDI VSRLDEQIRK LSQRAGLLAI GNVAAARDED
PAAQELGRLN SRIQEMRAQG ASLSGPDQIV LIELQRQYEN LNSSLEKRKG LQEQINGLGV
QDRLNALEMK KGGFSKDWLE ELKTRQDALK AGIITAKEYA AAVNEMNKRR YESTAEGKEA
AKLARAGKAG AGRIAKADLS SDLADIQIQY RMLTTASGNA ERLLDAQRAA GLVSEREYYA
QKRKFVEDNA ALQIRELEDE NKRYAQQAAT GADKINNEKK IAQNTAKMAE IRAKADTDIK
ISTLQQEEAN RQLEASYKAL EQSMAGYLKT SADRYQRELQ GMGLGNQWRD QNAAANQIND
RYESQRNDLR NNRERLELEK KWNSDLEEQY QRRLEIINDA NQKALGLDAD YWRRRLQMQQ
DWTVGASEAL TNYLNDANNT AALTEKAFTN GISGMEDALV SFVTTGKLSF SQLANSIIAD
ITRIIIKQQL AAAIGGAGGS NWLGGLVGGL FGTSGTAAVA NVLPGNPLDN LLNLTGNFVA
NAKGGVYDSP SLSMYSNQVH STPKVFAFAK GAGVFAEAGP EAIMPLTRNS AGVLGVRAMR
DTAGGDGAGN SRRAAAPINI NIPVAGQVDR RTKDQLAFRA SQELRRVQRF S
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