| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4053 |
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| Symbol | |
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| ID | 5749640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4459980 |
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| End bp | 4461143 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641299155 |
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| Product | periplasmic sugar-binding protein, putative |
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| Protein accession | YP_001565069 |
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| Protein GI | 160899487 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.299221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.087362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCTG CTGCTCCTTC TTCGGGACGC CCCGGTGGAC TCCACCGGGG CGTCTTGCCG
TGGGCGCTGC GTATGACCTA CATGGCCTGG GTGATGGGCG TGCTGGCGCA GTCGGCCGCT
GCCGCCGCGC AAAGCGTGGT CTTCATCAAC CCCGGCCGCT CCGACGAGAG CTACTGGACC
ACGGTCAGCG AGGCCATGCA GGACGCGGCC AGCAGCCTGG GCATGCAGCT GCAGGTGCGC
TATGCGCAGC GTGACCACCT GCGCCCCATC GAGATTGCGC GCCAGATTGC CGCCTTGCCC
AAGGCGCAGC GGCCCCGCTA CGTGATGTTT ACCAACGACT ACAGCGTGGC GCCTGAAATC
CTGCGCACGC TGGAGGCCGC AGGCATCGAC AGCTTCATGG CCTTCAGCGG CGTGCCCGAG
ACATTGCGCG GCCAGACCGG CGTGGCGCGG GAGCGCTATC GCCACTGGCT GGGCAGCCTG
GAGCCGGGCG CGGAGGAGGC CGGCTACCTG ACCGCCAAGT CACTGTTCGC CGCTGCGCGG
GCATCGGGCC AGGCGCGTGC GGCCGATGGC CGGCTGCACA TGGTGGCCAT TGCCGGGGAC
CGCTCCACGC CCTCCTCGGT GGAGCGCAAT GCCGGCATGC GCCGCGCGGC GGCCGAGGCC
AGCGACGTGG TGCTGCAGCA GGAAGTCTTT GGCGAATGGC GCCGCGAACG CGCCGAGCAG
CAGGCGGCCG TGCTGTTCCA GCGCTATCCC GAGGTGCGCC TGGTCTGGGC GGGCAACGAC
GAGATGGCCT TTGGCGCCAT GCAGGCCTGG CGGGCGCGGG GCGGCTCGCC GGGGCGTGAC
GCCTTCTTCA GCGCCATCAA TTCATCGGCC GCCGCCATGA CGGCGCTGCG CACGGGCGAG
CTGTCGGCAC TGGCGGGCGG CCATTTCCTG ACCGGCGCCT GGGCCCTGGT CATGCTCTAC
GACCATGCGC ACGGCGCCGA TTTCGCCTCC GAAGGGCTGG AGCAGGTGCG GCCCATGTTC
ACGCTGCTGG ACAAGTCCCA GATCGACCGC TACGAGCACA GGATCAGCGC GCCGCTGGCC
CCTCTGGACT TTCGCAGCTA CAGCAAGCAC CTCAATCCCC GGCTGCGGCG CTACGGATTC
GAGCTCAAGC ACCTGCTGCG CTGA
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| Protein sequence | MIPAAPSSGR PGGLHRGVLP WALRMTYMAW VMGVLAQSAA AAAQSVVFIN PGRSDESYWT
TVSEAMQDAA SSLGMQLQVR YAQRDHLRPI EIARQIAALP KAQRPRYVMF TNDYSVAPEI
LRTLEAAGID SFMAFSGVPE TLRGQTGVAR ERYRHWLGSL EPGAEEAGYL TAKSLFAAAR
ASGQARAADG RLHMVAIAGD RSTPSSVERN AGMRRAAAEA SDVVLQQEVF GEWRRERAEQ
QAAVLFQRYP EVRLVWAGND EMAFGAMQAW RARGGSPGRD AFFSAINSSA AAMTALRTGE
LSALAGGHFL TGAWALVMLY DHAHGADFAS EGLEQVRPMF TLLDKSQIDR YEHRISAPLA
PLDFRSYSKH LNPRLRRYGF ELKHLLR
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