Gene Daci_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3883 
Symbol 
ID5749466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4276387 
End bp4277127 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID641298981 
Productmolybdenum ABC transporter, periplasmic molybdate-binding protein 
Protein accessionYP_001564899 
Protein GI160899317 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID[TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0594941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.216536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAC GCATACTGTC CCGCGGCCTG GCGCCGCTCC TGGCGCTGTT GTTGGCTGGC 
TCGGCCAGCC TGGCCCATGC CGATGAAGGC CTGCTGCTGG CCGCTGGCGC CGGCTACCGC
AAGCCCGTGC TGGAACTGCT GCAGGCCTTC AGCCAGGCCA CGGACATTCG CGCCGAGGCC
AGCTTTGGCA ACATGAAGCA GATCGAGACC CAGGCCCGCC AGAACCCCGA GATCGCCGTG
CTGATTGGCG ACCGCGCCTT TGTCGAGCCC ATGCAACTGG CCGAGCGCTA CATCACGCTG
GGCCAGGGCC AGCTGGTGCT GGTGGCCGCG CGCGGCCAGC GCCTGGAAAG CGTGCAGGAC
CTGGCCAGGC CCGAATTCAA GCGCATTGCC ATCGCCGACC GCAGCAAGGC CGTGTACGGC
AACGCGGCGC GCATCTGCCT GGAGCGCCTG GGCCTGGCGC AGACGCTGGG CGAACGCCTG
GTCGAAGTGG CCACGGTGCC CCAGGTCAGC GCCTATGTGA CCACCGGCGA GGTGGACGCA
GGCTTTGTCA ACAAGACCGA GGCCCTGGTC CTGAAAGACC GCGTGGGCGC CAGCGTGCCG
GTGGCGGCCA GCTGCCATCC GCCCATCGAA CTGAGCCTGG CCGTGCTCAA GGGCCGCGCC
TCATCGCCGC AACTGCAGGC GCTGCTGGAC TTCATCGCCA CGCCGCAGGC CCGCCAGGTA
CTGGAGCGGC ACGGCCTTTG A
 
Protein sequence
MFKRILSRGL APLLALLLAG SASLAHADEG LLLAAGAGYR KPVLELLQAF SQATDIRAEA 
SFGNMKQIET QARQNPEIAV LIGDRAFVEP MQLAERYITL GQGQLVLVAA RGQRLESVQD
LARPEFKRIA IADRSKAVYG NAARICLERL GLAQTLGERL VEVATVPQVS AYVTTGEVDA
GFVNKTEALV LKDRVGASVP VAASCHPPIE LSLAVLKGRA SSPQLQALLD FIATPQARQV
LERHGL