Gene Daci_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3827 
Symbol 
ID5749410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4216191 
End bp4216559 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content66% 
IMG OID641298925 
Productresponse regulator receiver protein 
Protein accessionYP_001564843 
Protein GI160899261 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.21592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.16634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC TGTACGTTGA AGACAATGCC GACCTGCGCG AAACCATTGG CCTGCTGATG 
GAGAGCGAAT CACGCTTCGT GACCAGTTGC GCCACCGCCG AGCAGGCCCT GGAACTGGAT
GCGGCCCAGC CTTTCGACGT GGTGGTTTCC GATGTCAGCC TGCCCGGCCT GTCAGGCACC
GACCTGGCGC GGCAGCTGCT GGAGGCCGAT GCGCAGCGCT GGATCATCCT GTGCTCCGGC
TACGACCTGG GCCCCTACCC CACGGCCTGG GGCCCCCATG TGCGGACCCT GCTCAAGCCC
TTCGAGATCG AGGACCTGGA GACGCTGCTG GACTCCATCC AGGAAGCGCT CGGCAACCCC
GCCCACTGA
 
Protein sequence
MRILYVEDNA DLRETIGLLM ESESRFVTSC ATAEQALELD AAQPFDVVVS DVSLPGLSGT 
DLARQLLEAD AQRWIILCSG YDLGPYPTAW GPHVRTLLKP FEIEDLETLL DSIQEALGNP
AH