Gene Daci_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3812 
Symbol 
ID5749395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4193291 
End bp4194010 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID641298910 
Productalpha/beta hydrolase fold 
Protein accessionYP_001564828 
Protein GI160899246 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.281797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.255747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC CTTGCGTGGT ACTTCTGCCG GGCCTGCTGT GCGACGAGAC GGTCTGGCAC 
GAGCAGCAGG CGGCCCTGTC CTTTGCCGGT GTTGCCGAGT GCATTGTTCC GTCCTATGGC
GCGGCGGCCA CCATCGAAGA CATGGCGCGC CTTGTGCTGG ACTGCGTGGC GGCCGAGCGG
TTTTCGCTGG CGGGCCATTC CATGGGCGGG CGCGTGGCCC TGGCCATTGC CGACATGGCG
CCCCAGCGCG TGGAACGGCT GGCCTTGCTG GACACCGGCA TGGACCCCAT CGCCCCGGGC
GATGCCGGCG AGAGCGAACG CGCCAAGCGC ATGGCGCTCT TGCAGATCGC CCGGCACAGC
GGCATGCGCG AGATGGGCCT GCAATGGGCG CGCGGCATGG TGCATCCCGA CCGGCTTGAT
ACGCCACTGT TTGGCGAGGT GCTCGACATG GTGGCGCGCT TCACGCCCGA GGTGTTTGCT
GCGCAGATCA ATGCCTTGCT GAACCGCCCC GATGCGGGCG ATGTGCTCCG GCAACTGCGC
TGCCCGACCC TGCTGGCCTG CGGTCGCCAG GATGCCTGGA GCCCGCTGTC ACGCCATGAG
CGCATGCAGG CCCTGTGCCC GGGCGCCGAG CTGGTGGTGA TCGAGGACAG CGGCCACATG
AGCACCATGG AGCAGCCGCA GCAGGTGTCG CGGGCACTGC TCGACTGGAT GGGGCGCTGA
 
Protein sequence
MSRPCVVLLP GLLCDETVWH EQQAALSFAG VAECIVPSYG AAATIEDMAR LVLDCVAAER 
FSLAGHSMGG RVALAIADMA PQRVERLALL DTGMDPIAPG DAGESERAKR MALLQIARHS
GMREMGLQWA RGMVHPDRLD TPLFGEVLDM VARFTPEVFA AQINALLNRP DAGDVLRQLR
CPTLLACGRQ DAWSPLSRHE RMQALCPGAE LVVIEDSGHM STMEQPQQVS RALLDWMGR