Gene Daci_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3790 
Symbol 
ID5749373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4169571 
End bp4170359 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID641298889 
ProductABC transporter related 
Protein accessionYP_001564807 
Protein GI160899225 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00500294 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.911746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC AAGCCCAGGA CCTGTGCTGG AGCGCCGATG CCCGGCGTGC CGACGCCCGG 
CGCATCGTGG ACCAGGCCAG CCTCGCCCTG CACAGCGGCG AATGCGTGGG GCTCATCGGC
CCCAACGGCA GCGGCAAATC CACCCTGCTG CGCATGCTCT ACCGCGTGCT GCGGCCCGAC
GCAGGCTGCG TGCTGCTGGA CCAGCGCGAC ATCCGGGACA TGACGGCGCG CGAGTTCGCG
GCCCAGGTCT CGGTCCTGGC GCAGGAGGCG CCGCAGAGCT TTGACTTCAC CGTGCGCGAG
GCGGTGATGA TGGGCCGCAT CCCCCACCAG TCCCCCTGGG CTGGCGACAG CGCCGAAGAC
CTCGCCTGCA TGCGCCAGGC GCTGGCCCAG GTGAACGCCC TGGCGCTGGA GGAGCGGCGT
TTCTCCAGCC TGTCCGGCGG CGAGAAGCAG CGCGTTCTCG TGGCCCGCGC GCTGGCCCAG
CAGCCTCGGC TGATGCTGCT GGACGAGCCC ACCAACCACC TGGACATACG CCATCAGCTG
GAGTTGATGT CACTGGTCCG GCGCCTGCAG ATCAGCAGCA TCGTCGCCCT GCACGACCTC
AACATCGCCG CCCACTACTG CGACCGTCTC TATCTCATGG AACAAGGCCG CATCGTTGCC
CATGGCACAC CGGCGCAGGT GCTGACCCCT ACCACCATCG GCCAGGTCTA CGGCGTGGCT
GCCGAGGTGG ACATCCATGC CGCCACCGGC CGGCTGCGCA TCAGCTTCAT TCCCGATGAA
CTCCTCTGA
 
Protein sequence
MKLQAQDLCW SADARRADAR RIVDQASLAL HSGECVGLIG PNGSGKSTLL RMLYRVLRPD 
AGCVLLDQRD IRDMTAREFA AQVSVLAQEA PQSFDFTVRE AVMMGRIPHQ SPWAGDSAED
LACMRQALAQ VNALALEERR FSSLSGGEKQ RVLVARALAQ QPRLMLLDEP TNHLDIRHQL
ELMSLVRRLQ ISSIVALHDL NIAAHYCDRL YLMEQGRIVA HGTPAQVLTP TTIGQVYGVA
AEVDIHAATG RLRISFIPDE LL