| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3765 |
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| Symbol | |
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| ID | 5749348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4136944 |
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| End bp | 4138770 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298864 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001564782 |
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| Protein GI | 160899200 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.345998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA TCCACCCCAT CGTCGAGCAG GTCACGCGCC GCATCCGCGA GCGCAGTGCC
CAATCACGCG CCGCCTACCT GGAGCAGGTG GACGCCATGG CCGCGCGCCC GCCCGGCGCC
CAGTCCATGG GCTGTGCCAA TGTGGCCCAT GCCTTTGCGG GCATTCCAGG CGGCGACCGC
ATACGCATCG TGGAAGAGAA GGCGCCCAAC GTCGCCATCG TCACCGCGTA CAACGACGTG
CTCTCGGCCC ATGCGCCGCT GGCACGCTAT CCCGACATCC TCAAGGACGA GGCGCGCAAG
CTTGGCGCCA CGGCGCAGGT CGCCGGCGGC GTGCCGGCCA TGTGCGACGG CGTGACCCAG
GGCGCGCCAG GCATGGAACT GAGCCTGTTC AGCCGGGATG CCATTGCCAT GGGCACGGCC
ATCGCGCTGT CGCATGACGT GTTCGACGCC GCGCTGATGC TGGGCATTTG CGACAAGATC
GTGCCGGGCC TGCTGATCGG GGCCCTGCAT TTCGGCCATC TACCCACGGT GTTCGTGCCG
GCCGGCCCCA TGACCTCGGG CCTGTCCAAT GGCGACAAGG CCAAGGTGCG CGAACAGGCC
GCGCAGGGCC TGGTGGGCCG CAAGGAACTG CTGGCCGCCG AAACGGCTGC CTACCACAGC
GAAGGCACCT GCACCTTCTA CGGCACGGCC AACAGCAACC AGATGCTGCT GGAGGCCATG
GGCCTGCACG TGCCGGGCAC GGCCTTCATC AACCCGGCCG ACGGCGAACG CGAACTGCTC
ACGCGCGAGG CCATGCGCAG CGTGCTGGCC ATCACCAAGA ACCGCCGCTT CGCACCCATT
GGCCATGTGG TGGACGAGCG CTGCATCGTC AACGCCATGG TGGCCCTGCT GGCCACGGGC
GGATCGACCA ACCACCTGAT CCATTGGGTG GCCGTGGCGC GTGCGGCAGG CATCGTCATC
GACTGGAATG ATTTTTCGGA ACTCTCGGGC GTGGTGCCGC TGCTGGCCCG CGTCTATCCC
AACGGCAGCG CCGACGTGAA CCAGTTCCAG GCCGCAGGCG GGCCGGGCTA TGTGATCGGC
CAGCTGCTGA AGGCCGGCCT CATGCATGGC GATGTGCTCA CCGTGCGGCC CGAGGGCCTG
CAGGAATTTG CACGCATTCC CGCCGTGGAA GACGGTCATC TCGTCTGGCA CGAGGCCGAA
GTCTCCGGCG ACCTTTCCGT GCTGCGCCCG GCCGATGCGC CTTTCAGAGC CACGGGCGGG
CTCAAGCTGC TGTCCGGCAA CCTGGGGCGC AGCGTGATCA AGGTCAGCGC CGTGCCCGAG
GACCGCCATG TGGTCGAGGC GCCTGCGCGC GTCTTCGACT CGCAGGAAGC GCTGCAGCAG
GCGTTCAAGG CCGGCGAGCT GGACCGCGAT GTCATCTGCG TGGTGCGCTG GCAGGGTCCG
CGCGCCAACG GCATGCCCGA GCTGCACAAG CTCACCCCAC CGCTGGCCGT GCTGCAGGGC
AAGGGCTACA AGGTGGCCCT GGTCACGGAC GGCCGCATGA GCGGCGCCTC GGGCAAGGTG
CCCGCCGCCA TCCATGTCTC GCCCGAGGCC TGCGTGGGCG GGCCGCTGGC GCGCCTGCAA
GACGGGGACC TGGTACGCCT GGACGCCGTG GCCGGCACCC TGGCCGTGCT GGTCGATGAC
ACCGAATGGC AGCAGCGGCC CCTGGCCACC ATGCCGCAGG CACTGCGCCA GGCCAATGGC
CGGGGTTTTG GCCGCGAACT GTTTGCCGGA TTCCGGCGCC ACGCGCTCAG CGCAGAAGAG
GGAGCTTGTA CATGGATCAA CGACTGA
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| Protein sequence | MSTIHPIVEQ VTRRIRERSA QSRAAYLEQV DAMAARPPGA QSMGCANVAH AFAGIPGGDR
IRIVEEKAPN VAIVTAYNDV LSAHAPLARY PDILKDEARK LGATAQVAGG VPAMCDGVTQ
GAPGMELSLF SRDAIAMGTA IALSHDVFDA ALMLGICDKI VPGLLIGALH FGHLPTVFVP
AGPMTSGLSN GDKAKVREQA AQGLVGRKEL LAAETAAYHS EGTCTFYGTA NSNQMLLEAM
GLHVPGTAFI NPADGERELL TREAMRSVLA ITKNRRFAPI GHVVDERCIV NAMVALLATG
GSTNHLIHWV AVARAAGIVI DWNDFSELSG VVPLLARVYP NGSADVNQFQ AAGGPGYVIG
QLLKAGLMHG DVLTVRPEGL QEFARIPAVE DGHLVWHEAE VSGDLSVLRP ADAPFRATGG
LKLLSGNLGR SVIKVSAVPE DRHVVEAPAR VFDSQEALQQ AFKAGELDRD VICVVRWQGP
RANGMPELHK LTPPLAVLQG KGYKVALVTD GRMSGASGKV PAAIHVSPEA CVGGPLARLQ
DGDLVRLDAV AGTLAVLVDD TEWQQRPLAT MPQALRQANG RGFGRELFAG FRRHALSAEE
GACTWIND
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