Gene Daci_3755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3755 
Symbol 
ID5749338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4126382 
End bp4127914 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content65% 
IMG OID641298854 
Productcarboxyl transferase 
Protein accessionYP_001564772 
Protein GI160899190 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0296123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.253409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA TCCTGGATCA ACTGGAGACA AAGCGCGAAC AGGCCCGCCT GGGTGGCGGC 
CAAAAGCGCA TAGACGCACA GCACAAGAAG GGCAAGCTCA CGGCGCGAGA GCGCATCGAG
CTGCTGCTGG ACGACGGCAC CTTCGAGGAA TGGGACATGT TCGTCGAGCA CCGCTGCACC
GACTTCGGCA TGGAAAACAG CAAGATCCCC GGCGACGGCG TGGTCACCGG CTACGGCATG
ATCAACGGCC GCCTGGTCTT CGTCTTCAGC CAGGACTTCA CCGTCTTCGG CGGCGCGCTG
TCCGAGACCC ATGCCGAGAA AATCTGCAAG ATCATGGACC AGGCCATGAA GGTCGGCGCC
CCCGTCATCG GCCTGAACGA CTCGGGCGGC GCCCGCATCC AGGAAGGCGT GGCCTCGCTG
GGCGGCTATG CCGACGTGTT CCAGAAGAAC GTGCTGGCCA GCGGCGTGGT GCCGCAGATC
TCCATGATCA TGGGCCCCTG CGCGGGCGGC GCCGTGTATT CGCCGGCCAT GACGGACTTC
ATCTTCATGG TCAAGGACAG CAGCTACATG TTCGTCACCG GCCCCGAAGT CGTGAAGACG
GTGACGCACG AGGAGGTCAC GGCCGAGGAG CTGGGCGGCG CCATCACCCA CACCACGCGC
AGCGGCGTGG CCGACATGGC CTTCGACAAC GACGTGGAGG CGCTGATGAT GCTGCGCCGC
CTCTACAACT ACCTGCCGCT GAACAACCGC GAGAAGGCGC CCGTGCGCTA CACCTCGGAC
CCCGTGGACC GCGCCGACAA GTCGCTGGAC ACCCTGGTGC CCGACAACGC CAACAAGCCC
TACGACATGA AGGAGCTGAT CCTCAAGACC GTGGACGACG GCGACTTCTT CGAGCTGCAG
CCCGACTACG CCAGGAACAT CATCACCGGC TTCGCGCGCA TGGACGGGCA GACCGTGGGC
ATCGTCGCCA ACCAGCCCCT GGTGCTGGCC GGCTGCCTGG ACATCAAGAG CTCCATCAAG
GCCGCGCGCT TCGTGCGTTT CTGCGATGCC TTCAACATCC CCGTGGTCAC CTTCGTGGAC
GTGCCCGGCT TCATGCCCGG CACCAGCCAG GAGTACGGCG GCATCATCAA GCACGGCGCC
AAGCTGCTGT ACGCCTATGC CGAGGCAACG GTGCCGAAAA TCACCGTCAT CACGCGCAAG
GCCTACGGCG GCGCCTATGA CGTGATGGCC TCCAAGCACC TGCGCGGCGA CGTCAACCTG
GCCTGGCCCC ATGCCGAGAT CGCCGTGATG GGCGCCAAGG GCGCCGTGGA GATCATCTTC
CGCGAGGACA AGAACGACCC CGCCAAGCTG GCAGCGCGCG AGGCCGAGTA CAAGGCCCGT
TTCGCCAACC CCTTCGTGGC AGGCGCGCGC GGCTTCATCG ACGATGTGAT CCAGCCGCAT
GAGACGCGCA AGCGCATCTG CCGCTCGCTG CAGATGCTCA AGAACAAGCA GCTGGAAAAT
CCGTGGCGCA AGCATGGAAA CATCCCCTTG TGA
 
Protein sequence
MQDILDQLET KREQARLGGG QKRIDAQHKK GKLTARERIE LLLDDGTFEE WDMFVEHRCT 
DFGMENSKIP GDGVVTGYGM INGRLVFVFS QDFTVFGGAL SETHAEKICK IMDQAMKVGA
PVIGLNDSGG ARIQEGVASL GGYADVFQKN VLASGVVPQI SMIMGPCAGG AVYSPAMTDF
IFMVKDSSYM FVTGPEVVKT VTHEEVTAEE LGGAITHTTR SGVADMAFDN DVEALMMLRR
LYNYLPLNNR EKAPVRYTSD PVDRADKSLD TLVPDNANKP YDMKELILKT VDDGDFFELQ
PDYARNIITG FARMDGQTVG IVANQPLVLA GCLDIKSSIK AARFVRFCDA FNIPVVTFVD
VPGFMPGTSQ EYGGIIKHGA KLLYAYAEAT VPKITVITRK AYGGAYDVMA SKHLRGDVNL
AWPHAEIAVM GAKGAVEIIF REDKNDPAKL AAREAEYKAR FANPFVAGAR GFIDDVIQPH
ETRKRICRSL QMLKNKQLEN PWRKHGNIPL