| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3753 |
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| Symbol | |
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| ID | 5749336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4123025 |
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| End bp | 4125241 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298852 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001564770 |
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| Protein GI | 160899188 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.801598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.879758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCAA GGGCACCTGT CATTCACGAG CCTGAGAACA TGAGACAAGA CCATCCGACA
GCGCAGAACG GCCAGGAATT CGCAACTGCC GACCTGCAGA AATGGGCCCA GGCGGCCGCC
AAGGCCGCTC CCGGGGGCGA CATCCAGGCA CTGCACTGGA CCACGCCCGA CGGCATCGAC
GTCAAGCCGC TGTACACGGC GGCAGACACG GCCAACCTGC CCCATACGGA TAGCCTGCCA
GGCTTCGAGC CCTACATCCG CGGCCCGCAG GCCACCATGT ACGCGGGCCG GCCCTGGACC
ATTCGCCAGT ACGCGGGCTT TTCCACGGCC GAGGAGTCCA ACGCCTTCTA CCGCAAGGCG
CTGGCCGCCG GCGGGCAGGG CGTGTCGGTG GCCTTCGACC TGGCCACGCA CCGGGGCTAC
GACAGCGACC ATCCGCGTGT CACGGGCGAC GTGGGCAAGG CCGGCGTGGC CATCGATTCG
GTCGAGGACA TGAAGGTGCT GTTCGACCAG ATCCCGCTGG ACAAGATCAG CGTGTCCATG
ACCATGAACG GCGCGGTGCT GCCCGTGCTG GCCGGCTACG TGGTGGCGGC CGAGGAGCAG
GGCGTGGCCC AGGACCAGCT GTCGGGGACC ATACAGAACG ACATCCTCAA GGAGTTCATG
GTCCGCAACA CCTATATCTA CCCGCCCCAG CCGTCGATGC GCATCATCGG CGACATCATC
GAGTACACCA GCCGGAACAT GCCCAAGTTC AACTCGATCT CGATCTCGGG CTACCACATG
CAGGAGGCGG GCGCCAACCA GGCGCTGGAA CTGGCCTTCA CGCTGGCCGA CGGCAAGGAG
TACGTCAAGA CCGCCACGGC CAAGGGCATG GATGTGGACG ATTTCGCGGG CCGGCTGTCC
TTCTTCTGGG CCATCGGCAT GAATTTCTAC CTGGAGATCG CCAAGATGCG CGCGGCCCGC
CTGCTGTGGT GCCGCATCAT GAAGGGCTTC GGCGCCAAGA AGGCCAAGAG CCTGATGCTG
CGCACGCACT GCCAGACCTC CGGCTGGTCG CTGACCGAGC AGGACCCCTA CAACAACGTG
GTGCGCACCA CCATCGAGGC CATGGCCGCC GTCTTCGGCG GCACGCAGAG CCTGCACACC
AACAGCTTTG ACGAAGCCAT CGCGTTGCCC ACCGAGTTCT CGGCCCGCAT TGCGCGCAAC
ACGCAGCTGA TCATCCAGGA AGAGACCCAC ATCACCAATG TGATCGACCC CTGGGCCGGC
AGCTACATGA TGGAAAAGCT GACCCAGGAC ATGGCCGACG CCGCCTGGAA GATCATCGAG
GAGGTCGAGG CCATGGGCGG CATGACCGCC GCCGTGGACT CGGGCTGGGC CAAGCTCAAG
ATCGAGGCCG CCGCCGCCGA GAAGCAGGCG CGCATCGACT CGGGCAAGGA TGTCATCGTC
GGCGTCAACA AGTACAAGCT GGCCAAGGAA GACGCCATCG ACATCCTCGA GGTGGACAAC
GTCAAGGTGC GCGACAGCCA GATCGCGCGC CTGAACCAGA TCAAGGCCAG CCGCGATGCG
GCCAAGGTCG AGGCCGCCCT TCAGGCCCTG ACCCAGGCCG CCGAAAGCGG CGAGGGCAAC
CTGCTGGACC TGGCCATCCA GGCCGTGCGC CTGCGTGCCA CGGTGGGCGA GGTCTCGGAC
GCACTGGAGA AGGTTTTCGG GCGCCACCGC GCCGATACGC AAAAGGTGAC CGGCGTGTAT
GCAGCAGCCT ACGACTCGGC CGAGGGCTGG GAAAAGCTCA AGGGCGAGAT CGATGCATCG
TCCGAGCAGC TGGGCCGACG CCCGCGCGTG ATGATCGCCA AGCTCGGCCA GGACGGCCAT
GACCGCGGCG CCAAGGTGGT GGCCACGGCC TTTGCCGACC TGGGCTTCGA CGTGGACATG
GGCCCGCTGT TCCAGACGCC CGAGGAATGC GCGCGCCAGG CCATCGAGAA CGACGTGCAC
GCCGTGGGCG TGTCCACGCT GGCGGCCGGC CACAAGACCC TGGTGCCGGC CATCATCGAG
GAGCTGCGCC GCCAGGGCGC GGACGACATC ATCGTCTTCG TGGGCGGCGT GATTCCCGCG
CAGGACTACG ACTTCCTCTA CAACGCCGGC GTCAAGGGCG TCTACGGCCC GGGCACCCCC
ATCCCGGCCA GCGCCAAGGA TGTGCTCGAA CAGATCCGCC AGGCCAACAG CCTCTGA
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| Protein sequence | MPSRAPVIHE PENMRQDHPT AQNGQEFATA DLQKWAQAAA KAAPGGDIQA LHWTTPDGID
VKPLYTAADT ANLPHTDSLP GFEPYIRGPQ ATMYAGRPWT IRQYAGFSTA EESNAFYRKA
LAAGGQGVSV AFDLATHRGY DSDHPRVTGD VGKAGVAIDS VEDMKVLFDQ IPLDKISVSM
TMNGAVLPVL AGYVVAAEEQ GVAQDQLSGT IQNDILKEFM VRNTYIYPPQ PSMRIIGDII
EYTSRNMPKF NSISISGYHM QEAGANQALE LAFTLADGKE YVKTATAKGM DVDDFAGRLS
FFWAIGMNFY LEIAKMRAAR LLWCRIMKGF GAKKAKSLML RTHCQTSGWS LTEQDPYNNV
VRTTIEAMAA VFGGTQSLHT NSFDEAIALP TEFSARIARN TQLIIQEETH ITNVIDPWAG
SYMMEKLTQD MADAAWKIIE EVEAMGGMTA AVDSGWAKLK IEAAAAEKQA RIDSGKDVIV
GVNKYKLAKE DAIDILEVDN VKVRDSQIAR LNQIKASRDA AKVEAALQAL TQAAESGEGN
LLDLAIQAVR LRATVGEVSD ALEKVFGRHR ADTQKVTGVY AAAYDSAEGW EKLKGEIDAS
SEQLGRRPRV MIAKLGQDGH DRGAKVVATA FADLGFDVDM GPLFQTPEEC ARQAIENDVH
AVGVSTLAAG HKTLVPAIIE ELRRQGADDI IVFVGGVIPA QDYDFLYNAG VKGVYGPGTP
IPASAKDVLE QIRQANSL
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