Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3726 |
Symbol | |
ID | 5749309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4094148 |
End bp | 4094816 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641298825 |
Product | hypothetical protein |
Protein accession | YP_001564743 |
Protein GI | 160899161 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.01295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00196674 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCTGGC AATGGCTGAT CTCGGGGTTT GGGGAGGTGC GTCCCACCAC GGGCGACCGG GGTTACGGCC AGACGGTCAG CGGTCCCAGG TATGCGGAAG CCGTGAAGTT CGACCTGCGG TATCCGGGGC AGGTGTTTGA TGAAGAAACG GGGCTGTCGT ACAGCCTGCA CAGGTACTAC GATGCGGCGA CGGGGCGGTA TATCCAGGCG GACCCGATTG GGCTGGAGGG TGGGTGGAAT TGGTTTGGGT ATGTGGGTGG AAATCCATTG AATTTCATTG GCCCTAAGGG GCTTGAAGCT CAAATATGTA CTTATCCTGG ATTTAATAAC GACTGGCCTC ATGTATTTAC TTGTGTTAAT GCTAATTGCG CTGGCTGGTA TCCATCGGGG TATAGCGGGG CAAAACTAAA AGGACCATGG GCAGCAATAA TGAATAGCAA TGGTGCGTAT GTTGATGACA GCGATATTGT GGATAAAAGT TACTGTGGCA AAGTTGCTGG CTGTGATGAA ATATATATTG ACCAATGTGT TCTGGATTGT AGGTCTGGTG GGAATAAGCC GAGTAAATAT AATCTATTTA ATGAAAATTG CATGAGCACT GCGCAGCAGT GTGTGCAGAA GTGCGTTGTT AATTCTTGTA AGGCAAAAAT ATGGAATTTT TTAAGATAA
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Protein sequence | MAWQWLISGF GEVRPTTGDR GYGQTVSGPR YAEAVKFDLR YPGQVFDEET GLSYSLHRYY DAATGRYIQA DPIGLEGGWN WFGYVGGNPL NFIGPKGLEA QICTYPGFNN DWPHVFTCVN ANCAGWYPSG YSGAKLKGPW AAIMNSNGAY VDDSDIVDKS YCGKVAGCDE IYIDQCVLDC RSGGNKPSKY NLFNENCMST AQQCVQKCVV NSCKAKIWNF LR
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