Gene Daci_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3726 
Symbol 
ID5749309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4094148 
End bp4094816 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content48% 
IMG OID641298825 
Producthypothetical protein 
Protein accessionYP_001564743 
Protein GI160899161 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3209] Rhs family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.01295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00196674 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCTGGC AATGGCTGAT CTCGGGGTTT GGGGAGGTGC GTCCCACCAC GGGCGACCGG 
GGTTACGGCC AGACGGTCAG CGGTCCCAGG TATGCGGAAG CCGTGAAGTT CGACCTGCGG
TATCCGGGGC AGGTGTTTGA TGAAGAAACG GGGCTGTCGT ACAGCCTGCA CAGGTACTAC
GATGCGGCGA CGGGGCGGTA TATCCAGGCG GACCCGATTG GGCTGGAGGG TGGGTGGAAT
TGGTTTGGGT ATGTGGGTGG AAATCCATTG AATTTCATTG GCCCTAAGGG GCTTGAAGCT
CAAATATGTA CTTATCCTGG ATTTAATAAC GACTGGCCTC ATGTATTTAC TTGTGTTAAT
GCTAATTGCG CTGGCTGGTA TCCATCGGGG TATAGCGGGG CAAAACTAAA AGGACCATGG
GCAGCAATAA TGAATAGCAA TGGTGCGTAT GTTGATGACA GCGATATTGT GGATAAAAGT
TACTGTGGCA AAGTTGCTGG CTGTGATGAA ATATATATTG ACCAATGTGT TCTGGATTGT
AGGTCTGGTG GGAATAAGCC GAGTAAATAT AATCTATTTA ATGAAAATTG CATGAGCACT
GCGCAGCAGT GTGTGCAGAA GTGCGTTGTT AATTCTTGTA AGGCAAAAAT ATGGAATTTT
TTAAGATAA
 
Protein sequence
MAWQWLISGF GEVRPTTGDR GYGQTVSGPR YAEAVKFDLR YPGQVFDEET GLSYSLHRYY 
DAATGRYIQA DPIGLEGGWN WFGYVGGNPL NFIGPKGLEA QICTYPGFNN DWPHVFTCVN
ANCAGWYPSG YSGAKLKGPW AAIMNSNGAY VDDSDIVDKS YCGKVAGCDE IYIDQCVLDC
RSGGNKPSKY NLFNENCMST AQQCVQKCVV NSCKAKIWNF LR