Gene Daci_3723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3723 
Symbol 
ID5749306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4092042 
End bp4092467 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID641298822 
Productputative TIS1421-transposase orfA protein 
Protein accessionYP_001564740 
Protein GI160899158 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0053926 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000867735 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGCTG CCCTCATGGC AAGACGACCC GTTAGCAAAG AACTGTGGCG ACAGCTACAA 
CCCCTGATCC CAGCCTTCGT GCCTTCTGCC AAAGGCGGTG CGCGCAAACT CGCAGTCAGC
GATGAAGCTG CCCTCAACGG CATCTTGTTC GTGCTGCAAA CAGGCATTCC ATGGGAAGAC
CTTCCCCAAT CCCTGGGCTA CGGCAGCGGC ATGACTTGCT GGCGGCGTCT GCGCGACTGG
AATGCCGCTG GTGTCTGGGA GCAGCTGCAC CAAGCCATGC TGACTCGCTT GCGTGAACAT
GACCAAATCG ATTGGAGCCG GGCCAGCATT GATGGCTCCT CGGTACCAAG CCCCCGGGGG
GCCAGGAAAC GGGCCCAAAC CCCACGGACA GAGGCAAGCT CGGCTCCAAG CGGCACATCG
TCGTAG
 
Protein sequence
MLAALMARRP VSKELWRQLQ PLIPAFVPSA KGGARKLAVS DEAALNGILF VLQTGIPWED 
LPQSLGYGSG MTCWRRLRDW NAAGVWEQLH QAMLTRLREH DQIDWSRASI DGSSVPSPRG
ARKRAQTPRT EASSAPSGTS S