Gene Daci_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3713 
Symbol 
ID5749296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4080645 
End bp4081607 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID641298812 
Producthypothetical protein 
Protein accessionYP_001564730 
Protein GI160899148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00612587 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCTCG ATATCTCTCG GACAGATGAC GCCGTGCGCG ATGCGCTCAA AAAGCTGTCC 
CTGCTGTGGA AGTCAAGAGC GGCCGTGAAT CAGGACCTGC CTGATTACTG CGGCTTGGCG
TTCGACCCCG CCCGGCAGGA CTTCACCGCC TCGCTGCTGC CGTTTCGCGA CCACCAGGCA
TGGGTGGAGG CGCCACAGCA CCTGCGCGAC CAATGCCTGT CCTACGCCTG GGGCATCTAC
AACCTCAAGA CCATCTACAT CGAGTGCAAC GTGGTCACGC CGGCCTGCGA GGACATCATC
AAGACCCCGC CGCCCAGCGC CAACCGGGCG CTGCTGCAGG ACGTCATGTC CCAGGCCCTG
CTGGACGAGG CCCTGCACAC CCGCATGTCC ATCATGGCCT GCAACTACAT CTACGAGATG
CGCGGCCTGG CGCCGCTGGA CTACGCGGAC TTCAACCTCG TCGGCTGGCG CAACGGCGTG
CTGGCGCAGT GCGGCGCGGA ATGGGAGCGC CGCCTGGCCC GCTTCGCCAT TGCCTGCGCC
AGCGAGACCC TGATCACCGA CTACCTCAAG ACCATGGCCG AGGACCGCTC CATCCAGCCC
ATCTGCCACG AGGTCACGCG CACCCACGCC GTGGACGAAT GGAGCCACTC CAGCGTCTTC
AGCTCGGTGG CCACCGACAT CGTCCAGGGC CTGAGCAACC GCGAGCGCAG CTACCTGCGC
TCCATCATCC TCAAGACCGT GCAGATGTTC GCCAACAACG AGCTGGGCGC CTGGTCCACC
GTCTTCACCA TGGTCGGCAT GCCGCATGCG CGCGACATCC TGCACGACGT GGGCGACAGC
AACGAGATCG GCGTCTACAC CGACTCGGTG CAAAGCCTGA TCGACCGCAT CGGCCTGGCG
GGCCGCAACC TGGGCGGCAG CGTGGCGCTG GTGTCCTCGG TCCTCGAGGA GATGCAGGCA
TGA
 
Protein sequence
MNLDISRTDD AVRDALKKLS LLWKSRAAVN QDLPDYCGLA FDPARQDFTA SLLPFRDHQA 
WVEAPQHLRD QCLSYAWGIY NLKTIYIECN VVTPACEDII KTPPPSANRA LLQDVMSQAL
LDEALHTRMS IMACNYIYEM RGLAPLDYAD FNLVGWRNGV LAQCGAEWER RLARFAIACA
SETLITDYLK TMAEDRSIQP ICHEVTRTHA VDEWSHSSVF SSVATDIVQG LSNRERSYLR
SIILKTVQMF ANNELGAWST VFTMVGMPHA RDILHDVGDS NEIGVYTDSV QSLIDRIGLA
GRNLGGSVAL VSSVLEEMQA