Gene Daci_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3700 
Symbol 
ID5749283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4065932 
End bp4066573 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content70% 
IMG OID641298799 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001564717 
Protein GI160899135 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0395895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.207299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT ACAGCTTTTT CCGCAGCGGC ACCTCGCACC GCCTGCGCAT CGCGCTCAAC 
CTCAAGGGCC TGCGCCCTGA CTACTTTCCC GTGGACCTGC GCGTGGACGA GCAGGCCCAG
GCGCCGTTCA AGCAGGTCAA CCCGCAGGGC CTGGTGCCGG CGCTGACGCT GGACGATGGC
CGCACGCTGA TCCAGTCGCC GGCCATCATC GAATGGCTGG AAGAGCGCCA CCCCGAGCCG
CCGCTGCTGC CCGCCGACCC CGAGGACCGC GCCCAGGTGC GCGCGCTGGC CGCCATCGTG
GGCTGCGACG TGCATCCCAT CAACAACCGC CGCATCCTGC AGACCCTGCG CCGCCAGTTC
GGTGCGGACG AAGCCGCCAT CAACGCCTGG TGCGCCACCT GGATTGCCGA CGGCTTCGAC
GCCATCGAGG CACTGCTGGC GCAGGACACG CAGCGCGGCG ACTTCTGCTT CGGCCACGCA
CCCACGCTGG CCGATGTCTA CCTGGTGCCC CAGATCGAAA GCGCACGCCG CTTTGGCGTG
GACCTGGACC GCTGGCCGCT GATCAGCGCT GTGGACAGGG CCTGCGCGGC GCTGCCCGCC
TTTGCGCAGG CCGCGCCCCT GGCCCAGCCT GACGCCGGCT GA
 
Protein sequence
MKLYSFFRSG TSHRLRIALN LKGLRPDYFP VDLRVDEQAQ APFKQVNPQG LVPALTLDDG 
RTLIQSPAII EWLEERHPEP PLLPADPEDR AQVRALAAIV GCDVHPINNR RILQTLRRQF
GADEAAINAW CATWIADGFD AIEALLAQDT QRGDFCFGHA PTLADVYLVP QIESARRFGV
DLDRWPLISA VDRACAALPA FAQAAPLAQP DAG