Gene Daci_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3681 
Symbol 
ID5749264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4043207 
End bp4044787 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content64% 
IMG OID641298780 
Producthypothetical protein 
Protein accessionYP_001564698 
Protein GI160899116 
COG category[S] Function unknown 
COG ID[COG4222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.12875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0308963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCC CCACTTCCTC TTCCTGCCTG ATGGCAGTGA TCGCCGCCGC GGCTGCCTTG 
CTGAGCGCCT GCGCCGACAC CCGCCCGCTC CAGGCCGCCG GCTCCGAGAC GGTGACGCAG
ACCACCGGCG TCGGCAGCAT CCGTGCCACC GTCACGCGCC AGGACGTCCA GTTCGACGAC
AGGTTCTATT TCCCCTACGA AGGCCCACAC CCCGCCACCA AGGCCGATTT TCCCAAGGGC
TTTCTGCCAG CCTACGGTTC GGGCCTGGCC TTGAAGGGCA GGCGTGCCGA CGGCACGCTG
GAGTTCTACG CCATCACCGA TCGCGGCCCG AACGCGACCA CCGGCCCGGT CACGCAGATC
ACCGACGGCT CCAATCCCGC GGGCTTTGCC AGTTCCACGG TGTTTCCTTC GCCCAACTTC
ACTCCGTCCA TCGGCGTGAT CGCCCTCGGA AAGGACGGAG CCAGGCTCGT CTCCACCCTG
CCGCTCAGAT TCAGCGCCAC ACAGAACGCC AACGGCCGCG TGCAGCCACG GGGCCTCACA
GGCAACACGG GCGAGCAAGT CCTGGACGAC TCCTTCACCT ATCCCGGCAA GGCCAAGGGC
TACAGCGAAT TCGGCCTGGA CACAGAATCC GTGGTGGTGG ATGCCGCACG CAATGCGCTG
TGGGTGTCCG ACGAATACGG ACCCTTCATC GTGAAGATTG ACCCGGCGAC CGGCATCATC
CAGAAGAAAT ACGGGCCCGG CACCGGCGCG GCCGATCTGC CGGCCATTCT CGCCAAGCGC
CGCGCCAACC GTGGCATGGA GGGGCTGAGC ATCGATGCGG CCAGCGGCAA GCTGCACGGC
TTCCTGCAAA GCCCCCTGGA CGACGGCAAG GCCGACTACA CCACCGCTGC CGTTGCCGAC
GCCACTGGCA AATCGGAGAA CGTGCGCGAC TACGCTCGCT TTGTGCGCTG GGTGGAGTTT
GACCCGACCA CCGAGAAAAC CCGCCTGTTT GCCTTGCCCG TGGACAGCCG TTGGTACAAC
CAAGGCAAGA CCGGCAATGC CAAGCTGGGT GATGTGGTCT CACTGGGCAA GGGGAAGTTC
ATCGCCATCG AGCAAGGCAC GGGCAAGGAC AAGAAAGTCT TCAACGACCT GGTTCTGATC
GAGTTTCCGG CCAACGCCAC CGACATCACC GCGCTGGGCT CCGACCTGGA AAAGAGCAGC
CTGACTGGCA AGCCGGTCAA TGGCTCGGAC TATTCCAAGA TCGTGACGCT CAAGAAGACC
CGGCTCTTCA ACCTGAACGC CACCGGCTGG GTGGCCGAGA AGGCCGAAGG CCTGGCACTG
GTCGATGACT ACACGCTGGC GCTGACCAAC GACACCGACT TCGGTGTTTC GCTGGCCGTG
CTGGACGCCA GCGGCAAGGA AATCGAAGGC TCGGACGTCA CCAAATGCAT GGTGGACGCC
GAAGGCAAGA TCGTGAACGA CGGCCAATGC GCCAAGGGCG CGGCGAGCCT GCGCTTTACC
ACCAATGACG TCAACGATCG CACGCAGCGA CTGTGGACCT TTGGGTTCAG CAAGAAACTG
AGCGAATACG GCGCTCCCTG A
 
Protein sequence
MRPPTSSSCL MAVIAAAAAL LSACADTRPL QAAGSETVTQ TTGVGSIRAT VTRQDVQFDD 
RFYFPYEGPH PATKADFPKG FLPAYGSGLA LKGRRADGTL EFYAITDRGP NATTGPVTQI
TDGSNPAGFA SSTVFPSPNF TPSIGVIALG KDGARLVSTL PLRFSATQNA NGRVQPRGLT
GNTGEQVLDD SFTYPGKAKG YSEFGLDTES VVVDAARNAL WVSDEYGPFI VKIDPATGII
QKKYGPGTGA ADLPAILAKR RANRGMEGLS IDAASGKLHG FLQSPLDDGK ADYTTAAVAD
ATGKSENVRD YARFVRWVEF DPTTEKTRLF ALPVDSRWYN QGKTGNAKLG DVVSLGKGKF
IAIEQGTGKD KKVFNDLVLI EFPANATDIT ALGSDLEKSS LTGKPVNGSD YSKIVTLKKT
RLFNLNATGW VAEKAEGLAL VDDYTLALTN DTDFGVSLAV LDASGKEIEG SDVTKCMVDA
EGKIVNDGQC AKGAASLRFT TNDVNDRTQR LWTFGFSKKL SEYGAP