| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3675 |
|---|
| Symbol | |
|---|
| ID | 5749258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 4034958 |
|---|
| End bp | 4036121 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641298774 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001564692 |
|---|
| Protein GI | 160899110 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.29817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.111107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTC TGTGGAACGA AGAACAGGAA CAGATACGCG ACGCCGTCGA GCGCGCCTGC
GCACCCTTCG ATGCCGACTA CTGGCTGCGC AAGGACCACG AAGGCGGCTT CCCGCACGAC
TTCCACAAGG CCCTGGCCGA CGCGGGCTGG CTGGGCATTG CCATGCCCGA GGAATTCGGC
GGCGCGGGCC TGGGCATCAG CGAAGCGGCG CTGATGATGC ACACCATCTC GGCCACGGGC
GCAGGCCTGT CGGGCGCCTC GGCCGTGCAC ATGAACATCT TCGGCCTGCA CCCCGTCGTC
GTCTTCGGCA CGGACGAGCA AAAACGCCGC TGGCTGCCCC CGCTGATCGC GGGCACGGAC
AAGGCCTGCT TCGGCGTCAC CGAGCCCAAT GCGGGCCTCA ACACCCTCAA GCTGCAGACC
CGCGCCGTGC GTGATGGCGA CGTCTACGTG GTCCATGGCC AGAAAGTCTT CATCTCCACC
GCCCAGGTCG CCAACAAGAT CCTGCTGCTG GTGCGCACCA AGCCCGTGGA AGAGTGCAAG
GGCACGGAAG GCCTGAGCCT GTTCTACACC GACCTGGACC GCGAACGCAT CGAAGTGCGC
GAGATCGACA AGCTGGGCCG CAAATGCGTG GACACCAACC AGCTGTTCAT CGACGGCCTG
CGCATCCCCG CCGAGGACCG CATCGGCGAA GAGGGCAAGG GCTTCTCGTA CATCCTGCAC
GGCCTCAACC CCGAGCGCAT CCTCATCGCC GCCGAGGCCG TGGGCTTGGG CCGCGCCGCC
CTGGCGCGCG CCACCCAGTA CGCCAAGGAG CGCGTGGTCT TCGACCGCCC CATCGGCCAG
AACCAGGGGA TACAGCACCC GCTCGCCCAG GCCTGGATGG GGCTTGAGGC GGCCCACCTC
ATGGTGCAAA AGGCTGCCTT CCTCTACGAC AGGGGCCTGC CCTGCGGCGC CGAGGCCAAC
GCCGCCAAGT ACCTGGCGGC CGAAGCCTGC GCCAAGGCCT GCGAAACCGC CATCTTCACG
CACGGCGGCA TGGGCTACGC CAAGGAATAC CACGTGGAGC GCTACATGCG CGAATCCTGG
ATCCCGCGCC TGGCGCCCGT CAGCCCGCAA CTCATCATGT GCTTCATCGC CGAAAAGGTA
TTGGGCTTGC CTAAATCGTA TTGA
|
|---|
| Protein sequence | MDFLWNEEQE QIRDAVERAC APFDADYWLR KDHEGGFPHD FHKALADAGW LGIAMPEEFG
GAGLGISEAA LMMHTISATG AGLSGASAVH MNIFGLHPVV VFGTDEQKRR WLPPLIAGTD
KACFGVTEPN AGLNTLKLQT RAVRDGDVYV VHGQKVFIST AQVANKILLL VRTKPVEECK
GTEGLSLFYT DLDRERIEVR EIDKLGRKCV DTNQLFIDGL RIPAEDRIGE EGKGFSYILH
GLNPERILIA AEAVGLGRAA LARATQYAKE RVVFDRPIGQ NQGIQHPLAQ AWMGLEAAHL
MVQKAAFLYD RGLPCGAEAN AAKYLAAEAC AKACETAIFT HGGMGYAKEY HVERYMRESW
IPRLAPVSPQ LIMCFIAEKV LGLPKSY
|
|---|
| |